Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1440 |
Symbol | |
ID | 1169256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1502471 |
End bp | 1503229 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637343377 |
Product | hypothetical protein |
Protein accession | NP_717057 |
Protein GI | 24373015 |
COG category | [S] Function unknown |
COG ID | [COG2445] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTGGCTGT ATGGTTCGCA GGCGAAAGGA AATGCTAGCG AGCATAGCGA TTGGGATTTA GCCGTCGCAT TCGACCCGGT AAAGGCGGAC AGTGTGCTTG ATACTCGTAT TAGAGCTGAA CTGCTTGCTA TGGATTGGCA AAGGGCATTG GGGCTAGCCG AAGGAAAGCT GTCTGTTGTC GATATTAATC TAGCACCTAT CCCTTTAGCC TTCGGCATCA TTAATGCCAA CAAACTAATC TTTAGTCGAG ATGAAGGTCG AAGAATGCAA GAAGAGTCAC GCATTATGTC GCAAATGGAA CTCGATTATT CAGCCCAAAA CCACTTTATT ATTTTGGATA ATGCCTATAT CACGTCATTG CGCTTAAGCC TTAGCCGGTA TCAAGCCGAG CTTGGGGAAT TGCGTCAATT ACTCTGTCAG CGTCCACTAT CGAATCTAGA AGAACGCGCC GCAGAGAGGA CGTTACAGGT CTCTATTGAA GCTTGTATTG GCATTGCCAA GCATTGGGCT AAAGCACTGG CTGGACATAG CCCTCAGGAT GCCTACCAAG CATTTGAGAT CCTGTGTCAA CGAGGAGCAC AACCAGCTGA TGAATTAAAT GGCTGGCGTA AAGTGATAGG CCTGCGTAAT GCACTGGTAC ATGATTATCT GAATATTGAC CCTGAGATCA TCCGCAGTGT GATCACACAA GGTTACAGCG ATAGATTATT TATCTTTGCA GAGCAGGGTT TAGAGTGCTT ATCACTGAAT AGTGACTAA
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Protein sequence | MWLYGSQAKG NASEHSDWDL AVAFDPVKAD SVLDTRIRAE LLAMDWQRAL GLAEGKLSVV DINLAPIPLA FGIINANKLI FSRDEGRRMQ EESRIMSQME LDYSAQNHFI ILDNAYITSL RLSLSRYQAE LGELRQLLCQ RPLSNLEERA AERTLQVSIE ACIGIAKHWA KALAGHSPQD AYQAFEILCQ RGAQPADELN GWRKVIGLRN ALVHDYLNID PEIIRSVITQ GYSDRLFIFA EQGLECLSLN SD
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