| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1429 |
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| Symbol | dmaA-1 |
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| ID | 1169246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1491188 |
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| End bp | 1493698 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637343369 |
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| Product | anaerobic dimethyl sulfoxide reductase, A subunit |
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| Protein accession | NP_717049 |
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| Protein GI | 24373007 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACGCA GAAGTTTTCT AAAAATGAGT GCAGCCATGG GCTGCGCAGC AACGGTCACT
GGCTGTAACT CAGGTTCTAG TGATGTGAAT GTGGTGCCAC CTAAGCCGCC TGTAGGCGAT
GAAGTACAAA CTTGGTCATC TTGCTTGGTT AACTGTGGTT CGAATTGCCC CATCAAAGTA
TTTAGTCGTG ATGGCATCAT TACCCGTATT GAAACGGATC ATGAAACCAA TGATGAGTAT
GGCAACCACC AGATCCGAGC GTGTGCCCGT GGGCGTTCGC TGCGTAGCCG TACTTATGCT
CCCGATCGTT TACGCACACC TATGAAGCGT GTCGGTAAGC GTGGGGAAGC GAAGTTTGTG
CCAATATCAT GGGATGAGGC TGCTTCAACG ATTGCAAGTG AAATTCAACG TATTGCAAGT
AGTTACGGTA ACAAGTCGAT TTTGAAACAC TATGGAACAG GGGCTTATTA TGGATTTGCT
AGCTCGGCGT GTTTTGATCG TGTGCTCAAT CTGAATGGTG GATTCCTGAA GATTTATGGC
AATTATTCTT GGGCACAACA AAATGAAGCG GCCGCAGCAA CTGGGTTTGC TAGTACATCG
GGTTCTTCTT TAACGGCCTT ATACGATAGT GACCTGTTCC TCGGTATTGG TTACAACCCA
AGTGAAATGC GTCAAAGTGG GTCGGGTGAA GGATATGATT TCTTAAAGGC GCTGGAGGCG
AATGCTAACC TTGAAGTGAT TATGGTGGAC CCGCGCTATA CAGACTCAAT GGCGGGTAAA
GAAAGCCAGT GGTTACCGAT TAGACCTGGA ACCGATGCGG CATTTGCAGA AGCGATTGCC
TATGAAATGA TTAGTTCTGG ATGGGTCGAT ACTCATTCCA AGGCATTTTT AGACAAGTAC
TGCGTTGGAT TTGACAAGGC CTCTCTTGAA AAGCTTGTTG CTGAATTTAC CGCAAGTGGC
GATCCTAAAA AGACTCAATA TTTGCCTTAT ATTGATGTTG AAGACAACTA TCGCAACTAC
ATTCTTGGTG AAGGTAAGTT TGCCGATAAT GGCCCAAGAA CCCCCGCCTG GGCAGCTAAA
ATCTGCGGCA TATCGGAAGC AAATATTAAA TCTGTCGCTA GCAAGATTAT GAATGCTAAA
GCACCGTTTA TTGTTACCGG TGCGGGTGTA AACCGTCATG CTAATGGTGA ACAAGCCATG
CGTGCTTGCT ATATGCTTTC GTTCCTAACC GGCAAAGTAG GGCAGCCAGG CGTAAGTAAC
GGCGCATTGC CTTATCAAGG CAGTTTAAAC CGTGCAGGTA TGAGCGGTGG TAGTAATCCT
GTTAAAGAAT CAATTTCTTT CTTTACTTGG GCTGAAGCGA TTGAGCGTGG CCATGAAATG
ACCGCGCGTA AAGATGGGAT CCGTGGTACA GCTGATTTAG ATACTCCGCT TGGCGCAGAT
ATTAAAGCGG TATTTGCGAT TAACAGTAAC GCATTAATTA ACCAACATTC AGACTGTAAC
GGTACCGCTA AAATCCTCGA AGATGACACC AAATGTGAGC TTATTGTCGT GTGTGATTGC
TGGATGACAG CTAGCGCACG TTATGCGGAC ATCTTACTGC CAGATACAAC TTGGTTAGAG
TCGAATGACT TAGTCAATGA TAGCTATGCA TCAGGGATCA TGGGTTACTT AGTTGCCATG
AAAGCTGCCG TTAAGCCTAT GTGGGAAAGC ATTTCAATGT TTGAAATGGG ACGCTTAATT
GCCGCCAAAA TGGGTAAAGA AGCTGAGTAC ACAGAAGGTA AAGATGAAGC GGCTTGGTTA
GAAGAGCTAT ATCAAAAGAC CCGTACAAAT AGCGCGAATA CGGATGCACA ACCTGCCTTC
CCTAACAGTT ACGCTGAAGC GCAAAAGATT GGTGTGTTCC GTGCGTTTAG TAAGACGCCG
GTACTTGCAC TCGATAGCTA TATCAATGGC GGTAAAGCGG TGAGCACACC ATCCGGTAAG
GTAGAGATCT ACTCGCTGTC GATGGCGCAA AAGGGTAAAG ACTGGATCTT TAATCCTAAT
GTTAAAGGCG ACTACATCAC TGCAATACCT ATGTATCAAC CCACATGGGA AGGCTACGAC
GATGAAGATA CTAAGGATGA TTATCCTCTG CAATTAATGG GTTATCACAC CAAGGGGCGT
ACACACTCAA GTTATCATAA CGTGCCATGG CTGCGCGAAG CCGCAGAAGA TGCAGTATGG
ATGAACCCAG CCGATGCTTT AGGTCGTGGT TTAAGAGGTG GCGATAAAGT ACAGATGTGG
AACGATCGTG GCACTGTTGA ATTACCTGTA CGCATTACCC CAAGGGTTGC CCCTGGTGTT
GTGGCTTTAG GTCAGGGCGC TTGGTATCAA CCTGATATCG CCCGGATTGG AAGGAGCGGG
CACCCAATTG ATGTTGGTGG CTGTATTAAT ACGTTAACTC GTTACCAGCC AAGCCCTTTT
GCGAAGGGAA ACCCACAACA CACCAATCGT GTGCAGATCG TCAAGGCATA A
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| Protein sequence | MERRSFLKMS AAMGCAATVT GCNSGSSDVN VVPPKPPVGD EVQTWSSCLV NCGSNCPIKV
FSRDGIITRI ETDHETNDEY GNHQIRACAR GRSLRSRTYA PDRLRTPMKR VGKRGEAKFV
PISWDEAAST IASEIQRIAS SYGNKSILKH YGTGAYYGFA SSACFDRVLN LNGGFLKIYG
NYSWAQQNEA AAATGFASTS GSSLTALYDS DLFLGIGYNP SEMRQSGSGE GYDFLKALEA
NANLEVIMVD PRYTDSMAGK ESQWLPIRPG TDAAFAEAIA YEMISSGWVD THSKAFLDKY
CVGFDKASLE KLVAEFTASG DPKKTQYLPY IDVEDNYRNY ILGEGKFADN GPRTPAWAAK
ICGISEANIK SVASKIMNAK APFIVTGAGV NRHANGEQAM RACYMLSFLT GKVGQPGVSN
GALPYQGSLN RAGMSGGSNP VKESISFFTW AEAIERGHEM TARKDGIRGT ADLDTPLGAD
IKAVFAINSN ALINQHSDCN GTAKILEDDT KCELIVVCDC WMTASARYAD ILLPDTTWLE
SNDLVNDSYA SGIMGYLVAM KAAVKPMWES ISMFEMGRLI AAKMGKEAEY TEGKDEAAWL
EELYQKTRTN SANTDAQPAF PNSYAEAQKI GVFRAFSKTP VLALDSYING GKAVSTPSGK
VEIYSLSMAQ KGKDWIFNPN VKGDYITAIP MYQPTWEGYD DEDTKDDYPL QLMGYHTKGR
THSSYHNVPW LREAAEDAVW MNPADALGRG LRGGDKVQMW NDRGTVELPV RITPRVAPGV
VALGQGAWYQ PDIARIGRSG HPIDVGGCIN TLTRYQPSPF AKGNPQHTNR VQIVKA
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