| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1421 |
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| Symbol | ifcA-1 |
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| ID | 1169240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1479602 |
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| End bp | 1481371 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637343363 |
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| Product | fumarate reductase flavoprotein subunit |
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| Protein accession | NP_717041 |
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| Protein GI | 24372999 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAATA CCAAATTATT ACCGTTAGCC ATGTCGGCTT TTTTTATATC AACATTTAGT
TATGGACAAT CTTTATCAGA ATTCCATATT GATAAGGGTA ACAACTGCCA AACGTGTCAC
ACAAAACCTA TAAAAGTTGA TGATGCAGAA AACCATGAAA ATAAGTCCTG TGAAAGTTGC
CATGGAACTA TGGGCGAATT AGCTGCCAAA TCAAAATCTA AACTATCACC ACATCATAGT
CATCTTATTG ATGTGTCTTG TACCAGTTGT CATTCCGGTC ATAAACAGCC GGTATTTGTT
TGCCAAACTT GCCATGATTC TTTTAAAAAT GAGTTTAAAA TCCCCTTTTC TAACGATAAA
CCCGTACTGG ATAACTATCA GTTTCCAGAA GTCACCCAAG AAATGATTGA AACAGCCCTT
GCGAAGGCTC CACTTGAACA ACATCAAGTG ATTGTCATTG GTGCGGGAGC AGCAGGACAT
GCGGCAGCCA TTTCAGCGAG GCAACATGGC GTTGCAGATG TCGTCATTCT TGAAAAACAA
CCTTACATTG GTGGCAATAG CATGTTAGCT GCTGGCGGTA TGTCAGCCGC AGAAACCGTC
ACACAAGCCC TTAAGCATTA CCCTGACAGT AAGGCGCTGT GGTATGAAGA TACAATGAAA
GGTGGGCATA ACATAAACAA CCCTGATCTC GTTAAAATCT TGACAGAAAA CGGCAGTGCT
GGTGTTGATT GGCTGCAAGC AATGGGAGCA GATTTAACGT CGGCATCAAG TGCTGGGGGA
CATAATGCTG AGCGTTTACA TAGACCAACG GGTGGTGCGA AATCAGGTCC AGAAATTGTT
AACACCCTAA AAGAAACCGC CCAAAAACTC GGTGTTGAAA CCCGCACCAA CAGTAAAGTC
ATCCAGCTAG TGCAAAATAA ACAAGGAGTT ATTACTGGTG TCCTTGTTCA AGGCAAGCAC
TCAAAATTAC ATATACTCGG TGCTAAAGCG GTCATTATCG CTTCTGGCGG CTTTGCACGA
AATAACGAAT TAGTGGCTAA ATATCGCCCA GACTTAAAAG GTGTAGATGC CACTAATAAT
CCAGGCAACG TCGGCGATGC GCTCACTTTC GCTCCCAAAG TCGGTGCAGA TATTGTTGAC
GTCAAAGAAA TTCAAGCCTT CCCAACGGCG GCGGCAGGTA AAATGGTTAT CTCAGGCACT
GCACGGGGAG CTGGCGCTAT TATGCTGAAT AATGATGGAG AACGCTTCTG CGATGAGATG
GGACCAAGGG ATAAAGTCTC TGAATGTATC TGGGCGCAAA AAGGTAAAGA TGCGTGGTTA
GTGTTTGATG AAACCGTCTT AGATAGGCTT GGTCAACTGC GAGGAATGTT AGATTTAGGT
ATTATCTTCA AAGGCAATTC AGCTGATGAA ATGGCTAAAG CGACGAAGAT GAATGCTCAA
AAATTTGACC AAGCGATAAA ACGTTATAAC GATTTTAAAG TGAAAGGCAA AGATGCAGAT
TTTGCTCGTA AGAATATGGC CGATGATCTT CAATATCCTA TTTATGCGGT CAAAATTAAA
CCCGCGGTTC ACCATACTAT GGGCGGCTTA AAAATTAACA CTAAAACAGA AGTCATTGAC
CAGAATGGGT TACCAATAAA AGGTCTTTTT GCAGCCGGAG AAGTCACTGG AGGGGTGCAT
GGTGCAAATA GATTGGCGGG CAATGCAATA GCTGACACTA TCGTATTTGG GCGAATTGCT
GGAGAACAAG TAGCTAATTC TATTAAATAA
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| Protein sequence | MLNTKLLPLA MSAFFISTFS YGQSLSEFHI DKGNNCQTCH TKPIKVDDAE NHENKSCESC
HGTMGELAAK SKSKLSPHHS HLIDVSCTSC HSGHKQPVFV CQTCHDSFKN EFKIPFSNDK
PVLDNYQFPE VTQEMIETAL AKAPLEQHQV IVIGAGAAGH AAAISARQHG VADVVILEKQ
PYIGGNSMLA AGGMSAAETV TQALKHYPDS KALWYEDTMK GGHNINNPDL VKILTENGSA
GVDWLQAMGA DLTSASSAGG HNAERLHRPT GGAKSGPEIV NTLKETAQKL GVETRTNSKV
IQLVQNKQGV ITGVLVQGKH SKLHILGAKA VIIASGGFAR NNELVAKYRP DLKGVDATNN
PGNVGDALTF APKVGADIVD VKEIQAFPTA AAGKMVISGT ARGAGAIMLN NDGERFCDEM
GPRDKVSECI WAQKGKDAWL VFDETVLDRL GQLRGMLDLG IIFKGNSADE MAKATKMNAQ
KFDQAIKRYN DFKVKGKDAD FARKNMADDL QYPIYAVKIK PAVHHTMGGL KINTKTEVID
QNGLPIKGLF AAGEVTGGVH GANRLAGNAI ADTIVFGRIA GEQVANSIK
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