| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1418 |
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| Symbol | |
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| ID | 1169237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1475755 |
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| End bp | 1476882 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637343360 |
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| Product | apbE family protein |
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| Protein accession | NP_717038 |
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| Protein GI | 24372996 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTACT TATTGTCTTT TGCTGTATTA ATTTATGTTT TTATTATGTC CACAACGGCA
AATGCGACTT TCTCGCCATT TGACTGCAAT ACCAATGCAA CGTTTAATTA TGAGCAAGGC
AAAGGCAGTA TAAATACGCT AAAATATTTT GGCACATCCA TTACCATTGA TATTTATGAG
GCGGATAAAG ACAAAGCCTA TTTAGCATTA TGCCATGCCC TTAATGTGGT ACAGGAATAT
CACTATTTAG CATCAAACTT TAGCACTTAC CCTGGTTACA CTAATATTCA GACCATCAAT
AACAATCCTG AAAAGTTACA TCATATCGAT GCGAAATTGA CCGAAATATT AACAACCAGC
ATTGAATGGC ATGGCATTAC CCAAGGCCGA TTTAACATTG CCCTAGCCCC CGTTTTAGAG
GTTTGGCGAA GCTATCGTAA ACGCTGCCAA CAGGGTGGTG CATGCGAACT GCCCAGCGAT
ACCGAATTAG CCAATGCGGC AAAACACATT GATATAAAAC AGATAACACT CGATGCGAAC
AATAATACCA TTCAAATGAA GGCCGGAATG AAGTTGGATT TAGGCGGTAT TGCCAAAGGT
TGGATGGTTG AAAAAGTGTA TGACCAATTA AAAGCCGATA ATATTAATGC ATTCATGATT
AATGCCGGTG GAAATATCCG CCACTTTGGT ACACACCCTG ATGGTCGCCA ATTTATTACG
GCTATCGAAA ATCCATTAAT CCGTAAATAT CAATTAGAAC ATAAAGATTT TAACGAGATT
AACAACGGTG ATATTTACCA TGAAATCATT CAAGGTGAAG ATATTACCAT TGTATCAAGT
GGTAATTATC TCAATTATTA CGCAGTGAAT GGTCAAGAGT ATCATCATAT TATTGACCCA
ACGACACTTT ACCCGAAAAA ACAAGGTATC TCAGTATCCG TCATTATGAA GAATAAACCC
ATTCTCGCTG ATGTGATTTC AACCAGTTTA TTTTTATTGC CGATGCCCGA AGCGCAAGAT
TTAATAAAGC GTATCGGCGA TATTGAAGCG GTATGGTTTC TGGATGAACA AGGACATAAA
ATCGCCACGC CACAATTTGA ACAATATCGC GCTAAGCTCA ATCCTTAG
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| Protein sequence | MKYLLSFAVL IYVFIMSTTA NATFSPFDCN TNATFNYEQG KGSINTLKYF GTSITIDIYE
ADKDKAYLAL CHALNVVQEY HYLASNFSTY PGYTNIQTIN NNPEKLHHID AKLTEILTTS
IEWHGITQGR FNIALAPVLE VWRSYRKRCQ QGGACELPSD TELANAAKHI DIKQITLDAN
NNTIQMKAGM KLDLGGIAKG WMVEKVYDQL KADNINAFMI NAGGNIRHFG THPDGRQFIT
AIENPLIRKY QLEHKDFNEI NNGDIYHEII QGEDITIVSS GNYLNYYAVN GQEYHHIIDP
TTLYPKKQGI SVSVIMKNKP ILADVISTSL FLLPMPEAQD LIKRIGDIEA VWFLDEQGHK
IATPQFEQYR AKLNP
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