Gene SO_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1416 
Symbol 
ID1169235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1473203 
End bp1473802 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content47% 
IMG OID637343358 
ProductDNA-binding response regulator 
Protein accessionNP_717036 
Protein GI24372994 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCGC TTTACCTCGT GGATGATGAT CAAGATGTAC TGGATTCCCT CAGCTGGATG 
CTTGAAGGGA TGGGGCTTAA CTGCAAAGGC TTTAACGCTG CGGATGCATT TTTAAAGAGT 
GTTGATATCA AGCAACCCGC CGTACTACTG CTGGACATCA AAATGCCAGG CATGGATGGC 
GTTGCACTGT TAAACCATTT AAATCAAGCA CAAAGTGCAA TTAGCGTCAT CATGCTCACT 
GGCCACGGCA CCATTGCAAT GGCCGTAGAC TGTATCCAAC AGGGCGCACT TAATTTTCTT 
GAAAAACCCG TTGATGGCGA GAAGCTATTT CAGCTTTTGA CCCAAGCCCA ACAACATACT 
GAGCAAAAAT GGCACCAACA AAATTTGCAA TTAGACATAG CCAATCGGCT TGCCACCCTC 
AGCCAGCGTG AAACACAAGT CATGGAAGGC ATACTGGCGG GTAAAATGAA CAAAGTCATT 
GCGGCGGAGC TAGATATCGC GCAGCGAACC ATTGAGTTAC ACAGGCAAAA AGTCATGCAA 
AAAATGCACG TGAGTAACGC CGCCGAACTC GCTTGGTTGC TCGCCAATCA TAAACAGTAA
 
Protein sequence
MTPLYLVDDD QDVLDSLSWM LEGMGLNCKG FNAADAFLKS VDIKQPAVLL LDIKMPGMDG 
VALLNHLNQA QSAISVIMLT GHGTIAMAVD CIQQGALNFL EKPVDGEKLF QLLTQAQQHT 
EQKWHQQNLQ LDIANRLATL SQRETQVMEG ILAGKMNKVI AAELDIAQRT IELHRQKVMQ 
KMHVSNAAEL AWLLANHKQ