Gene SO_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1409 
Symbol 
ID1169228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1465778 
End bp1466356 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content48% 
IMG OID637343351 
Producthypothetical protein 
Protein accessionNP_717029 
Protein GI24372987 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCG ATTTTTATAA TCAAAACGCC AGCTCGTTTT ATGCCTCGAC GGTAGAAGTT 
GACTCTTCCT CCCTACTTGA ACAATTTACC CCTTACTTAC CGAAAGGTGG CAGCGTACTT 
GATGCAGGTT GCGGCTCAGG TAGAGACAGT AAACGATTGA TCGAACTTGG TTTTCACGTT 
GATGCCTTTG ATGCCAGTGC AGCTCTTGCC ACGCTCGCGC AGCAGTTGCT CGGCAAGCCT 
GTTAGGGTTG CCACCTTTAT GCAGTTCACA TCGACTCTGC AATATGACGG TATTTGGGCC 
TGTGCCTCAC TGCTGCATGT ATCAAAAGCC TCACTACCAG ATGCCTTCGC GCATCTTGCC 
AGTATGTTGA AATCAGGCGG TGCGTTTTAC TGCTCATTCA AATATGGACA GGGTGAAGTC 
GAACGTGATG GCCGCAGCTT TACCCACTGT GATGAAGCAC TCTTAGCCGA GCTATTAACT 
GGTTCGCCAC TTGTGATTGA TAAAGTCTGG CTAACAACCG ATTTACGCGT TGGACGTGAA 
AACGAACAGT GGCTCAATGC AGTACTCCTT AAGCGGTAA
 
Protein sequence
MSIDFYNQNA SSFYASTVEV DSSSLLEQFT PYLPKGGSVL DAGCGSGRDS KRLIELGFHV 
DAFDASAALA TLAQQLLGKP VRVATFMQFT STLQYDGIWA CASLLHVSKA SLPDAFAHLA 
SMLKSGGAFY CSFKYGQGEV ERDGRSFTHC DEALLAELLT GSPLVIDKVW LTTDLRVGRE 
NEQWLNAVLL KR