| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1405 |
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| Symbol | |
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| ID | 1169224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1460995 |
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| End bp | 1462134 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637343347 |
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| Product | transglutaminase family protein |
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| Protein accession | NP_717025 |
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| Protein GI | 24372983 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAAGAC GTGATTTTTT AAAAGGTGCA GCAATTCTCT CGGCAGCAGG AATCGTTATG
CCAGTATTGG CGGCCTCAAC ACAGACGAGT GCAGTGACAG ATAAAGGTGT TGGCCGTCGC
CGTTTTACCT TAACTAATAC CTATCAATTA GCCGCGCCAG AAGGCTCATC AGGCGTGGTG
AAGTTATGGG TGCCATTGCC CGAAAACACG GCCTTTCAAC AGGTTGAAAA ACTTAACTTT
AGCGGCACTT ATCAAGATGC TTATATCAGT GCCAATAACC ATTATGGCGC CAAAACCCTG
TTTGCCACTT GGCCCGATGC TAAAGGTAAA ATGACCTTAA CATTAGAATT AGTGATAGAA
ACCCAAGATT GGGAGCCCCT TAAAAGTGGC GAGTTAAGCC ATTATCGCGC GCCAGCAAAG
CCTGAGTATC CTGCTGAAGT GGCCATCTAC CTTAAGCCAA CCAAGCATAT GCCAGTGGAC
GGTATTGTGA AGCAGACCGC CGATAAGATT GTGGGTAAGG AGACCGAACC GCTTAAACAA
GCACAACTCA TTTATAACTG GGTGAGTGCC AATATGTACC GTGATAACAG TGTGATAGGT
TGCGGTAATG GTGATGTGGC CGCGATTCTT GAAAGTGGCA AACTCGGTGG AAAATGTACT
GATATCAACT CAGTGTTTGT GGCACTGATG CGCGCAGTGG GTGTGCCCGC CCGTGAAATG
TTTGGCATTC GTTTAGGCCA AGCCATCAAA ATGGGTAAAT ACTCCAAAAA AGCCTTTGGT
AGTGCCGACG AAAAAGGTGT TGCCGATGTC ACTGGTGGCC AACATTGCCG TGCCATGTTC
TACCTTGCTG GTTATGGCTG GTTACCCGCC GATCCTGCGG ATGTGACTAA AATGCGCCTC
ACCGAGAACA AGGAACATAG CGATCCTGCA GTGCAAGCTG TGAATGACTA CCTATTTGGT
AACTGGGAAA TGAATTGGAT AGGCTTTAAC TATGGCCGTG ACTTTGACTT ATTCCCCGCC
GCAGAGCAGA CTCCACTCAA CAATTTTGGT TACCCTTACG CTGAAGTGGA TGGCGACCCT
GTAAATTACT ATGAGCCAAA AGTATTTGCC TATGACTACC AGTCAAGCGA GCAGCGTTAA
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| Protein sequence | MQRRDFLKGA AILSAAGIVM PVLAASTQTS AVTDKGVGRR RFTLTNTYQL AAPEGSSGVV
KLWVPLPENT AFQQVEKLNF SGTYQDAYIS ANNHYGAKTL FATWPDAKGK MTLTLELVIE
TQDWEPLKSG ELSHYRAPAK PEYPAEVAIY LKPTKHMPVD GIVKQTADKI VGKETEPLKQ
AQLIYNWVSA NMYRDNSVIG CGNGDVAAIL ESGKLGGKCT DINSVFVALM RAVGVPAREM
FGIRLGQAIK MGKYSKKAFG SADEKGVADV TGGQHCRAMF YLAGYGWLPA DPADVTKMRL
TENKEHSDPA VQAVNDYLFG NWEMNWIGFN YGRDFDLFPA AEQTPLNNFG YPYAEVDGDP
VNYYEPKVFA YDYQSSEQR
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