Gene SO_1403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1403 
Symbol 
ID1169222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1458599 
End bp1459873 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content49% 
IMG OID637343345 
Producthypothetical protein 
Protein accessionNP_717023 
Protein GI24372981 
COG category[S] Function unknown 
COG ID[COG3681] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCCC AATGGCAGCA GTATATTCAA ATCATCAATC AAGTCGTTAA ACCCGCTTTA 
GGCTGCACTG AGCCCATTGC TGCGGCTTAC GCAGCCGCGG TAGCACGTAC ATTATTAAAT
GATGATCCTG ATTCAATTGC GGTACAGGTC TCTGATAATC TTTATAAAAA CTCAATGGGC
GTGTATGTAC CTGGCACGGG TAAAATCGGT CTAGCGATTG CCGCGGCAGC GGGCGCTCTT
GCAGGCAACG CCGATGCTGG CCTAGAAGTG CTTGCCAGCG TTACCCCCGA GCAAGTTGCT
CAGGCTCAAG CCTTAATTGA TGCTGCAAAG GTAAAAGTTG AGCGTACCGA GACCGATGAA
TTTATTTATT GCTGCGTGAC CTTAACCTCC GGTGAGCAAG AGGCCATGGT GAAAATCTGT
GGCGGACATA CCTTAATTGC GGAAAAACGC TTAAATGGTG AGTTAGTGTT CACTGCGGAT
AACGCTCAAG CGAAGGCGAC GGGGTCTATC TGTGATGGTG TAGATATCAA CATTGAATCG
ATTTACCGTT TCGCCGAAGA AGTGCCCTTC GAAGAAATCC AATTTATCCT TAAAGCCTCT
GAATTAAACA GTAAATTATC CGATGAAGGC ATGTCCAAAC CCTATGGGCT AGAAGTCGGC
CGCACCATGA AAAACGGTAT TGCCGCGGGG ATTATTGGCG AAGACTTACT CAATAAAATT
GTGATGCTGA CTGCGGCGGC TTCGGATGCG CGTATGGGCG GTGCTAATCT GCCCGCCATG
AGCAATTTAG GCAGTGGTAA TCAAGGGATT GCGGCCACGA TTCCGGTGGT GATCACCGCC
CAGTGTTATA AAGTCAGTGA AGAAAAACTG GCGCGCGCGC TGATTATGAG CCATTTAGGG
GCGATTTATA TTAAGTCCCA CTACCCGCCA TTATCGGCAT TTTGTGGCAA TACCGTCACC
AGCGCGGCGG CCTCTATGGC GATGGTGTAT TTAGCGGGCG GCAGCTTCGA GCAATCCTGT
TTTGCGATTC AAAACGTCAT CAGCGATAGC TCAGGCATGG TCTGCGATGG CGCCAAAGCC
TCCTGCGCCA TGAAGGTAAG CACCTCTTCG AGTGCAGCGG TACGTTCGTT CTTGATGGCG
CTCAGTAGCC AAAACGTGTC AGGACAAGGC ATCATCGCCA ATCATGTTGA AAAAACCATT
AAGAACATTG GCAAAATGGT CCTTAACGGC ATGTCCTCTA CGGATGTCAC CATTATCAAC
ATCATGTCGG AATAA
 
Protein sequence
MKPQWQQYIQ IINQVVKPAL GCTEPIAAAY AAAVARTLLN DDPDSIAVQV SDNLYKNSMG 
VYVPGTGKIG LAIAAAAGAL AGNADAGLEV LASVTPEQVA QAQALIDAAK VKVERTETDE
FIYCCVTLTS GEQEAMVKIC GGHTLIAEKR LNGELVFTAD NAQAKATGSI CDGVDINIES
IYRFAEEVPF EEIQFILKAS ELNSKLSDEG MSKPYGLEVG RTMKNGIAAG IIGEDLLNKI
VMLTAAASDA RMGGANLPAM SNLGSGNQGI AATIPVVITA QCYKVSEEKL ARALIMSHLG
AIYIKSHYPP LSAFCGNTVT SAAASMAMVY LAGGSFEQSC FAIQNVISDS SGMVCDGAKA
SCAMKVSTSS SAAVRSFLMA LSSQNVSGQG IIANHVEKTI KNIGKMVLNG MSSTDVTIIN
IMSE