Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1403 |
Symbol | |
ID | 1169222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 1458599 |
End bp | 1459873 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637343345 |
Product | hypothetical protein |
Protein accession | NP_717023 |
Protein GI | 24372981 |
COG category | [S] Function unknown |
COG ID | [COG3681] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCCC AATGGCAGCA GTATATTCAA ATCATCAATC AAGTCGTTAA ACCCGCTTTA GGCTGCACTG AGCCCATTGC TGCGGCTTAC GCAGCCGCGG TAGCACGTAC ATTATTAAAT GATGATCCTG ATTCAATTGC GGTACAGGTC TCTGATAATC TTTATAAAAA CTCAATGGGC GTGTATGTAC CTGGCACGGG TAAAATCGGT CTAGCGATTG CCGCGGCAGC GGGCGCTCTT GCAGGCAACG CCGATGCTGG CCTAGAAGTG CTTGCCAGCG TTACCCCCGA GCAAGTTGCT CAGGCTCAAG CCTTAATTGA TGCTGCAAAG GTAAAAGTTG AGCGTACCGA GACCGATGAA TTTATTTATT GCTGCGTGAC CTTAACCTCC GGTGAGCAAG AGGCCATGGT GAAAATCTGT GGCGGACATA CCTTAATTGC GGAAAAACGC TTAAATGGTG AGTTAGTGTT CACTGCGGAT AACGCTCAAG CGAAGGCGAC GGGGTCTATC TGTGATGGTG TAGATATCAA CATTGAATCG ATTTACCGTT TCGCCGAAGA AGTGCCCTTC GAAGAAATCC AATTTATCCT TAAAGCCTCT GAATTAAACA GTAAATTATC CGATGAAGGC ATGTCCAAAC CCTATGGGCT AGAAGTCGGC CGCACCATGA AAAACGGTAT TGCCGCGGGG ATTATTGGCG AAGACTTACT CAATAAAATT GTGATGCTGA CTGCGGCGGC TTCGGATGCG CGTATGGGCG GTGCTAATCT GCCCGCCATG AGCAATTTAG GCAGTGGTAA TCAAGGGATT GCGGCCACGA TTCCGGTGGT GATCACCGCC CAGTGTTATA AAGTCAGTGA AGAAAAACTG GCGCGCGCGC TGATTATGAG CCATTTAGGG GCGATTTATA TTAAGTCCCA CTACCCGCCA TTATCGGCAT TTTGTGGCAA TACCGTCACC AGCGCGGCGG CCTCTATGGC GATGGTGTAT TTAGCGGGCG GCAGCTTCGA GCAATCCTGT TTTGCGATTC AAAACGTCAT CAGCGATAGC TCAGGCATGG TCTGCGATGG CGCCAAAGCC TCCTGCGCCA TGAAGGTAAG CACCTCTTCG AGTGCAGCGG TACGTTCGTT CTTGATGGCG CTCAGTAGCC AAAACGTGTC AGGACAAGGC ATCATCGCCA ATCATGTTGA AAAAACCATT AAGAACATTG GCAAAATGGT CCTTAACGGC ATGTCCTCTA CGGATGTCAC CATTATCAAC ATCATGTCGG AATAA
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Protein sequence | MKPQWQQYIQ IINQVVKPAL GCTEPIAAAY AAAVARTLLN DDPDSIAVQV SDNLYKNSMG VYVPGTGKIG LAIAAAAGAL AGNADAGLEV LASVTPEQVA QAQALIDAAK VKVERTETDE FIYCCVTLTS GEQEAMVKIC GGHTLIAEKR LNGELVFTAD NAQAKATGSI CDGVDINIES IYRFAEEVPF EEIQFILKAS ELNSKLSDEG MSKPYGLEVG RTMKNGIAAG IIGEDLLNKI VMLTAAASDA RMGGANLPAM SNLGSGNQGI AATIPVVITA QCYKVSEEKL ARALIMSHLG AIYIKSHYPP LSAFCGNTVT SAAASMAMVY LAGGSFEQSC FAIQNVISDS SGMVCDGAKA SCAMKVSTSS SAAVRSFLMA LSSQNVSGQG IIANHVEKTI KNIGKMVLNG MSSTDVTIIN IMSE
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