| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1397 |
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| Symbol | |
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| ID | 1169216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1453830 |
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| End bp | 1454267 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637343339 |
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| Product | cytosine deaminase |
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| Protein accession | NP_717017 |
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| Protein GI | 24372975 |
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| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0590] Cytosine/adenosine deaminases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATGAAT TTTTACAGGC CGCCATTGAT GAAGCCAAAC AAGGATTAGC CGAAGGGGGT
ATTCCCATTG GCTCGGTATT GGTGATTGAC GGTAAAATTA TCGCTCGTGG CCACAATAAG
CGCGTTCAAC AAGGCAGCGC TGTGCTCCAT GCAGAAATGG ATTGCCTTGA AAACGCTGGC
AGATTAACCG CCGCCGATTA TCAAAAGGCC ACGCTCTATT CAACCCTCTC CCCCTGCGAT
ATGTGTAGCG GTGCCATTTT GCTCTACGGC ATCCCCAAAG TGGTGGTGGG TGAAAATGTC
ACCTTCCAAG GCCCTGAAGC CTATGTCCAG TCCCGCGGCG TTGATGTGAC TGTGGTCGAT
AATCCCGAGT GTAAACAACT GATGCGCGAT TTTATCGCCG CCAAGCCCCA ACTGTGGAAT
GAAGATATTG GCGAATAA
|
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| Protein sequence | MDEFLQAAID EAKQGLAEGG IPIGSVLVID GKIIARGHNK RVQQGSAVLH AEMDCLENAG
RLTAADYQKA TLYSTLSPCD MCSGAILLYG IPKVVVGENV TFQGPEAYVQ SRGVDVTVVD
NPECKQLMRD FIAAKPQLWN EDIGE
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