Gene SO_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1393 
Symbol 
ID1169212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1450446 
End bp1451063 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content49% 
IMG OID637343335 
ProductTetR family transcriptional regulator 
Protein accessionNP_717013 
Protein GI24372971 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATGCAGG GCACTGAGAG TCAGGCAGGT ACGCCATCGG ATAAACGGCA GCAATTGGTC 
ACGACCGCCT TTAAACTATT TTATTTTCAA AGTGTTCATG GAGTCGGGAT TAATCAGATC
CTGCAAGAAT CGGCGATTGC CAAGAAGACC CTGTACCACC ATTTTGTCAG TAAAGATGAG
TTAGTCAAAG CTGTGGTTCG TTATCGCGAC GAGACTTTTT ATCAATGGCT TAGCGAACGA
GTGAACGCAT CGCCAGCGGG ACGAGAGGGC ATTCGTGGGT TATTTAGGGC GCTCGATGAT
TGGTTTAATC AAAGGGTGCC ACAGCTGTGC GAATTTCGCG GCTGTTTTTT TATCAATGTC
AGCGCCGAAT TTACTGAGCC GAGTCATCCG GTGCACCAAC TCTGTGCTCT GCATAAACAG
CGAGTGGCGA GTTTAATTGA GCGGCAAGTG TCGGCATTGG GCTTGCCAGA AGCTAAGACC
CAATATCTCG TAGCTGCGAT AGGTTTACTT AAAGAGGGCG CGATAGTTTC GGCACAATTG
AAGGGTGAAA CTCAGTCAGC ACTGTTGGCA CTGGCAGTGG TTGAGCAGTT ACTCGATGCT
GCGACTTGTG CTGTTTAG
 
Protein sequence
MMQGTESQAG TPSDKRQQLV TTAFKLFYFQ SVHGVGINQI LQESAIAKKT LYHHFVSKDE 
LVKAVVRYRD ETFYQWLSER VNASPAGREG IRGLFRALDD WFNQRVPQLC EFRGCFFINV
SAEFTEPSHP VHQLCALHKQ RVASLIERQV SALGLPEAKT QYLVAAIGLL KEGAIVSAQL
KGETQSALLA LAVVEQLLDA ATCAV