Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1393 |
Symbol | |
ID | 1169212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1450446 |
End bp | 1451063 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637343335 |
Product | TetR family transcriptional regulator |
Protein accession | NP_717013 |
Protein GI | 24372971 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATGCAGG GCACTGAGAG TCAGGCAGGT ACGCCATCGG ATAAACGGCA GCAATTGGTC ACGACCGCCT TTAAACTATT TTATTTTCAA AGTGTTCATG GAGTCGGGAT TAATCAGATC CTGCAAGAAT CGGCGATTGC CAAGAAGACC CTGTACCACC ATTTTGTCAG TAAAGATGAG TTAGTCAAAG CTGTGGTTCG TTATCGCGAC GAGACTTTTT ATCAATGGCT TAGCGAACGA GTGAACGCAT CGCCAGCGGG ACGAGAGGGC ATTCGTGGGT TATTTAGGGC GCTCGATGAT TGGTTTAATC AAAGGGTGCC ACAGCTGTGC GAATTTCGCG GCTGTTTTTT TATCAATGTC AGCGCCGAAT TTACTGAGCC GAGTCATCCG GTGCACCAAC TCTGTGCTCT GCATAAACAG CGAGTGGCGA GTTTAATTGA GCGGCAAGTG TCGGCATTGG GCTTGCCAGA AGCTAAGACC CAATATCTCG TAGCTGCGAT AGGTTTACTT AAAGAGGGCG CGATAGTTTC GGCACAATTG AAGGGTGAAA CTCAGTCAGC ACTGTTGGCA CTGGCAGTGG TTGAGCAGTT ACTCGATGCT GCGACTTGTG CTGTTTAG
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Protein sequence | MMQGTESQAG TPSDKRQQLV TTAFKLFYFQ SVHGVGINQI LQESAIAKKT LYHHFVSKDE LVKAVVRYRD ETFYQWLSER VNASPAGREG IRGLFRALDD WFNQRVPQLC EFRGCFFINV SAEFTEPSHP VHQLCALHKQ RVASLIERQV SALGLPEAKT QYLVAAIGLL KEGAIVSAQL KGETQSALLA LAVVEQLLDA ATCAV
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