| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1391 |
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| Symbol | |
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| ID | 1169210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1448280 |
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| End bp | 1449611 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637343333 |
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| Product | Short-chain fatty acid transporter |
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| Protein accession | NP_717011 |
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| Protein GI | 24372969 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2031] Short chain fatty acids transporter |
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| TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAACCA AAGCAGCAAA ACCTCTGGTC AAGCTGGTCG ACCGTTATTT ACCCGATCCC
TATATCTTTG TCTTACTCCT CACGTTAGTC GTGATGATCT CGGCCGTGGT GGCCGAGCAA
AAAACACCCC TGGACGTCAT CAGCTACTGG GGCGATGGTT TTTGGGCACT GCTGAGTTTT
TCAATGCAGA TGCTATTAGT GCTGGTGGCG GGATTTATGC TCGCCAGCTC GCCACCGATT
AAAAAATTGC TTGATGCGAT TGCTGGATTC GCTAAGTCTG CGCCGCAGGC GATTATCTTA
GTGACGTTGG TTTCTCTGGC TGCCAGTTGG ATTAACTGGG GCTTTGGTTT GGTGGTCGGC
GCGTTATTTG CCAAAGCGTT AGCCCGCAAG TTACGAGTGG ACTACCGTTT GTTGGTTGCC
AGTGCGTACT CGGGTTTTGT GGTTTGGCAC GGTGGCTTGG CGGGTTCGAT TCCGTTAACC
ATTGCCACTG CTGGGCACTT TGCAGAAGCA CAGATTGGCA TTATTCCTAC CAGTGATACC
ATTTTTGCCA GTTTTAACTT GCTGTTAGTG TTGATTTTAT TTGTGGTGAT GCCGCTGGTA
AACCGCTTTA TGTTGCCAGA AGACAAAGAC AGCATCTATA TCGACCCTAA GGCGCTTGAA
GATGTGAGCA GTGAAGAGAG CAACACAGGG CATGCGCCAA ACGCGATGAT GCGTCCCGCG
GATAAATTAG AAAACAGCCG TTTACTGGGC TGGAGTGTAG GCGGCGCAGG GCTGGTGTAC
TTAGGTTATT ATTTTGCGGT GCAAGGCGGC AGCTTAAACC TTAATTTAGT TAACTTTTTG
TTTTTGTTCC TCGCGATTGT GCTGCATCAA ACGCCACGCA GTTTACTGCT TAGCCTTAAC
GAAGCGATTA AAGGCGGCGC GGGTATTGTG ATTCAGTTTC CTTTCTACGC TGGCATTATG
GCGGTGATGA TGCAATCGGG ATTAGCCCAA AGCATCTCCG AAGGATTCGT GGCCATTGCC
AGCGCTGAAA GCCTGCCATT TTGGAGTTTT ATCAGCGCAG GCATCGTGAA TATTTTTGTG
CCTTCGGGCG GCGGACAATG GGCGGTGCAG GCCCCGATTA TGTTGCCTGC TGCCGAAGCC
TTGGGCGCCG ATGTGGCACG TGTTGCCATG GCTGTAGCAT GGGGTGATGC GTGGACGAAT
CTTATTCAGC CTTTCTGGGC ACTGCCTGTG CTGGCCATTG CCGGATTAAA GGCGCGGGAT
ATTATGGGAT TTTGTTTAAT GCAGTTGATT ATCACAGGTG TGATTATCAG TATCGCGTTG
AGCTGGTTTT AA
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| Protein sequence | MLTKAAKPLV KLVDRYLPDP YIFVLLLTLV VMISAVVAEQ KTPLDVISYW GDGFWALLSF
SMQMLLVLVA GFMLASSPPI KKLLDAIAGF AKSAPQAIIL VTLVSLAASW INWGFGLVVG
ALFAKALARK LRVDYRLLVA SAYSGFVVWH GGLAGSIPLT IATAGHFAEA QIGIIPTSDT
IFASFNLLLV LILFVVMPLV NRFMLPEDKD SIYIDPKALE DVSSEESNTG HAPNAMMRPA
DKLENSRLLG WSVGGAGLVY LGYYFAVQGG SLNLNLVNFL FLFLAIVLHQ TPRSLLLSLN
EAIKGGAGIV IQFPFYAGIM AVMMQSGLAQ SISEGFVAIA SAESLPFWSF ISAGIVNIFV
PSGGGQWAVQ APIMLPAAEA LGADVARVAM AVAWGDAWTN LIQPFWALPV LAIAGLKARD
IMGFCLMQLI ITGVIISIAL SWF
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