| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1383 |
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| Symbol | |
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| ID | 1169204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1439566 |
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| End bp | 1440867 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637343327 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | NP_717003 |
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| Protein GI | 24372961 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTTG AATCTTTTAG TTTTTGCCCC GAGATTTTAC GCGCTATCTC AGATTGCGGT
TATCAAAAAA TGACACCGAT TCAGCAGCAA GCGATCCCCG CCATCCGCCG CGGCCAAGAT
GTGCTCGCCA GCGCGCAAAC TGGCACGGGT AAAACCGCCG CCTTCGCACT GCCGATACTG
CAAAAAATGG TTGAAAACCC AAGCGAGACC TTAAAATCTA ATACCCGGGT ACTCATCCTC
ACCCCAACAC GCGAACTGGC CGCCCAAGTA GCGGAAAACG TTGAAGCCTA CAGCAAGTAT
TTAAATTTCA GCGTATTAAC GATTTACGGC GGCGTAAAGG TTGAGACTCA AGCCCAAAAG
TTAAAACGCG GCGCCGATAT TATTGTCGCG ACCCCAGGCC GTTTACTCGA ACACCTCACC
GCCTGTAACT TAAGTCTGTC TAGCGTTGAC TTTTTAGTCC TCGATGAAGC CGATCGCATG
CTGGATATGG GCTTTAGTGC CGACATCCAA AAAATCCTCC AAGCGGTCAA TAAGAAGCGT
CAAAACCTAC TGTTTTCGGC CACCTTCTCC AGCGCAGTGA AAAAACTGGC CAATGAGATG
ATGATCAAAC CCCAAGTGAT CAGCGCCGAT AAACAAAACA CCACCGCCGA TACTGTAAGC
CAAGTGGTTT ATCCGGTAGA GCAGCGTCGT AAACGCGAGC TGTTATCTGA GTTGATTGGT
AAAAAGAACT GGCAACAAGT GTTGGTCTTT ACCGCGACCC GCGATGCGGC GGATACTCTG
GTTAAAGAAT TAAACTTAGA CGGTATTCCC TCTGAAGTGG TACACGGTGA AAAGGCCCAA
GGTAGCCGTC GCCGTGCGCT GCGTGAGTTT GTGTCCGGTA AAGTGCGCGT ATTAGTCGCG
ACCGAAGTGG CCGCCCGCGG TTTAGACATT CCCAGTCTTG AGTATGTGGT GAACTTCGAC
TTACCCTTCC TTGCCGAAGA TTATGTTCAC CGTATCGGCC GTACAGGTCG AGCAGGTAAA
AGTGGCGTGG CAATCTCATT TGTAAGCCGT GAAGAAGAAC GCACCCTTGC GGATATTGAA
AAACTCATCG GCCAAAAAAT TCGCCGCATT ACCGTACCTG GATATGAGGT CGGTAGCCGT
GACTTGCTGT TAAAGCAGCT ACAAACCCGC CGCAGTTTCG CTAAGAAACA ACAGCGACAG
GACAATGTTA GCGAGCAAAT GATTGCCGAG AAAAGCATGC AGGGCCGCCG CGTTAAAATG
AAAGTTGGCC AAGCACCAAG CAAAGCGAAA AAGCTAAAAT AA
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| Protein sequence | MRFESFSFCP EILRAISDCG YQKMTPIQQQ AIPAIRRGQD VLASAQTGTG KTAAFALPIL
QKMVENPSET LKSNTRVLIL TPTRELAAQV AENVEAYSKY LNFSVLTIYG GVKVETQAQK
LKRGADIIVA TPGRLLEHLT ACNLSLSSVD FLVLDEADRM LDMGFSADIQ KILQAVNKKR
QNLLFSATFS SAVKKLANEM MIKPQVISAD KQNTTADTVS QVVYPVEQRR KRELLSELIG
KKNWQQVLVF TATRDAADTL VKELNLDGIP SEVVHGEKAQ GSRRRALREF VSGKVRVLVA
TEVAARGLDI PSLEYVVNFD LPFLAEDYVH RIGRTGRAGK SGVAISFVSR EEERTLADIE
KLIGQKIRRI TVPGYEVGSR DLLLKQLQTR RSFAKKQQRQ DNVSEQMIAE KSMQGRRVKM
KVGQAPSKAK KLK
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