Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1355 |
Symbol | |
ID | 1169176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 1410722 |
End bp | 1411510 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637343299 |
Product | hypothetical protein |
Protein accession | NP_716975 |
Protein GI | 24372933 |
COG category | [R] General function prediction only |
COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCATTT TTTCTGCCTC AGCCATGTTT TTTTATTGCA TTGCATTGGT ATTAGTGACA AGCCGGCTCT TCCATCCTCA AGGTCCTAAT CGTAAAGCCG TTGCAGGTAT CGCAGCGATT GCGGTGGTTC TGCACGCTGC CGCCCTCTCA CAGGCGATAT TTACGACTGA TGGACAAAAT TTTAGCCTGA CCAACGTGAT ATCCTTAGTG AACTGGATCA TCGCCTTTAC CTTTACTGTG ATGATGTTTA GGTTGAAGGT GATAGTGGTT GTGCCCGTGG TTTATGCCTG CTCGGTGTTA TCGGTGGCAT TGCTATGGTT ACTCCCGCCT AAATTTATCA TCCATTTTGA GCTGTATCCT GAAGTCTTAG CCCACGTTGT GCTATCACTT ATGGCTTACA GTGCATTAAT GATCGCCGCA CTATACGCTA TCCAATTAGC GATGATCCAA AACAAGCTCA AAAAGAAACA ATTGATGTTA AGCCCTAGCA TTCCGCCGCT GATGACAGTG GAAAAGCAGC TGTATCATTT GGTGATTATT GGGGTCATTT TACTGAGTTT ATCCCTCGCC ACTGGCTTTA TCTTCCTCGA TGATATGTTT GCCGATGGCA AAGGCCATAA GGCAATTTTG TCGATCATCG CTTGGTTTGT GTATATCGCT ATGCTATGGC AGCAATATTG GGTTGGCTGT AAAATCCGTA CCGCAGTCAT TTACACCTTA ACGGGCGCAA CCTTGTTATC CTTAGCTTAT TTTGGTGCTC GCATTGTCAA AGAGTTAATT CTTAGTTAA
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Protein sequence | MVIFSASAMF FYCIALVLVT SRLFHPQGPN RKAVAGIAAI AVVLHAAALS QAIFTTDGQN FSLTNVISLV NWIIAFTFTV MMFRLKVIVV VPVVYACSVL SVALLWLLPP KFIIHFELYP EVLAHVVLSL MAYSALMIAA LYAIQLAMIQ NKLKKKQLML SPSIPPLMTV EKQLYHLVII GVILLSLSLA TGFIFLDDMF ADGKGHKAIL SIIAWFVYIA MLWQQYWVGC KIRTAVIYTL TGATLLSLAY FGARIVKELI LS
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