| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1354 |
|---|
| Symbol | |
|---|
| ID | 1169175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 1409349 |
|---|
| End bp | 1410620 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637343298 |
|---|
| Product | hemolysin protein, putative |
|---|
| Protein accession | NP_716974 |
|---|
| Protein GI | 24372932 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGACGCTA TATCGACAAG CGCACTCCTC ATCTTCTTAC TGGTGCTTAT CCTTTTTTCT
GCCTACTTTT CAGGTTCTGA AACCGCCATG ATGACCCTTA ATCGCTATCG ATTAAGGCAT
CTCGCCTCAA ACGGCCATAA AGGTGCCATT CGAGCCCTTA AATTGTTAGA ACGCCCAGAC
CGCTTAATTG GCTTGATTTT GATTGGCAAT AACCTGGTCA ATATCCTCGC CGCGTCCATC
GCCACGATTA TCGGTATGCG CCTTTGGGGC GATTTAGGCG TCGCCATTGC ATCAGGTGTG
CTTACATTAG TCGTGCTCGT CTTTGGCGAG GTCACGCCTA AAACCATTGC TGCATTAAAT
CCAGAACGTA TCGCTTTTCC ATCAAGCTAT TTGCTTATTG CGCTATCAAA AATTTTTGCC
TATGTCGTCA CCAGCGTCAA TTTCATCACC ACGGGAATAC TGCGTTTAGT TGGCATAAAA
TCTATCAGTA GCAGTGATGC GTTAAGCAAG GAAGAACTTC GCACAGTCGT TCATGAAGCT
GGTGCCTTGA TCCCCCAGCG CCACCAAGAA ATGTTGCTAT CGATCTTAGA CTTAGAAAAA
GTCACCGTGG AAGATATCAT GGTGCCACGT TCAGATATCT ACGCGATTAA CGTCAACGAT
GACTTTAAAT TTATCAATCG CCAAGTAATC CAAAGTCCGC ACACTCGCGT ACTGGTTTAC
CGCGATACCA TTGACGATGC CGTTGGCTTT ATTCATTTGC GGGATGCCTT GCGCCTGCAA
TCAAAAGAGC AGTTCAGTAA ATCTTCATTG CTGCGCGCCG TCAAAGAACT CTACTTTATT
CCAGAAGGTA CGCCGCTGAA TGTGCAATTA GCCAATTTCC AGCACAACAA AGAGCGCATT
GGCCTCGTGG TTGACGAATA CGGTGATATT CAAGGGCTCG TCACGCTCGA GGACATTCTT
GAAGAGATTG TTGGCGACTT CACCACCTCG ATGTTGGCAA CGCCAAGTGA AGATATCAAT
GTCCAGCAAG ATGGCAGCTA TTTAGTGAAT GCCAGTATAA CCATCCGTGA TTTGAATAAA
GAGATGAAAT GGGATTTTCC AACGGATGGC CCTAAAACCC TTAACGGCCT CATTCTGGAA
TATTTAGAGG ATATCCCGTC CGAAAATACC AGCCTACGCC TTGCTGGTTA CCCACTCGAG
GTAATTGAAG TAGCAGATAA TATGGTCAAA ACCGTGCGCA TTATCCCGCA GCATTATCAA
TCACCACACT AA
|
|---|
| Protein sequence | MDAISTSALL IFLLVLILFS AYFSGSETAM MTLNRYRLRH LASNGHKGAI RALKLLERPD
RLIGLILIGN NLVNILAASI ATIIGMRLWG DLGVAIASGV LTLVVLVFGE VTPKTIAALN
PERIAFPSSY LLIALSKIFA YVVTSVNFIT TGILRLVGIK SISSSDALSK EELRTVVHEA
GALIPQRHQE MLLSILDLEK VTVEDIMVPR SDIYAINVND DFKFINRQVI QSPHTRVLVY
RDTIDDAVGF IHLRDALRLQ SKEQFSKSSL LRAVKELYFI PEGTPLNVQL ANFQHNKERI
GLVVDEYGDI QGLVTLEDIL EEIVGDFTTS MLATPSEDIN VQQDGSYLVN ASITIRDLNK
EMKWDFPTDG PKTLNGLILE YLEDIPSENT SLRLAGYPLE VIEVADNMVK TVRIIPQHYQ
SPH
|
|---|
| |