Gene SO_1353 details

Gene Information

• Locus tag: SO_1353
• ID: 1169174
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 1408754
• End bp: 1409281
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637343297
• Product: hypothetical protein
• Protein accession: NP_716973
• Protein GI: 24372931
• COG category: [S] Function unknown
• COG ID: [COG4539] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATCCG CCGTAGAGCA GTTATCAACC TATAAAAGTG TGCATTTAAA TCCGCGCAAT 
ATTCAAACTC ATTTCATTGG TATTCCATTG ATTATTTGGT CGGCATTTTT ATTGTTTGCG 
ACGATCCGAA TTCCCCTTGG CGATGCTGAT AATGTTAACC TTGGCATGAT ATTAGCCATT 
GGCATAATGC TTTATTATCT GCGATTGCAT GCTAAGTTGG CGTTGGGGCT TGCACTCTTT 
TTAGCGCCCG TCATCTATAC CACTGAGCTA GTTGCTCATT CCGAAAATGC TTTTGGGTTG 
GCGATAACCG TATTTATTGT GGGGTGGATT TTTCAGCTGA TTGGCCATCG ATACGAGAAG 
GCGAAGCCCG CCTTTGTGGA TGATTTAAAT CAACTGTTAA TTGGTCCCTT TTTCTTAATG 
GCTGAAGTGT ATTTTATGTT GGGATTAGAG AAGCAGCTCA ATGCTGAAAT TACGCCCATC 
GCGATTGAAA AGCGCCGCGC GCTCGAAGCG CATTTAAAAA CTAAATAA 

 

Protein sequence

MKSAVEQLST YKSVHLNPRN IQTHFIGIPL IIWSAFLLFA TIRIPLGDAD NVNLGMILAI 
GIMLYYLRLH AKLALGLALF LAPVIYTTEL VAHSENAFGL AITVFIVGWI FQLIGHRYEK 
AKPAFVDDLN QLLIGPFFLM AEVYFMLGLE KQLNAEITPI AIEKRRALEA HLKTK