Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1350 |
Symbol | recO |
ID | 1169171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1406677 |
End bp | 1407378 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637343294 |
Product | DNA repair protein RecO |
Protein accession | NP_716970 |
Protein GI | 24372928 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGGG GTTATGTTTT ACACCATCGC CCCTATCGGG AGTCTAGCGC GCTGGTCAAT CTCTTGGTCG ACGGTATTGG GCGTGTCGAT GCCGTCGCGC GAGTAGGGAG CGGTAAACGC TCCATCAAAA GTATCCTCCA ACCCTTTCAG CCGCTGATTT TTGAATTTAG CGGTAAATCT GAACTCAAGA ACATCAGCCA AATTGAAGCG GCGGCTCCAG CCGTGCCTTT ATCGGGTTAT AGCCTGTATG CGGGCATGTA TATTAATGAG TTGCTGATGC GCACCTTGTC AGTTCAGCAT AATGCTGAGG CGTTATTCTT TATCTATCAT CAAGCTTTAG TGGGGTTAGC GGCACAGTTT TGCGAGTCGA AACTGCGTTA TCTTGAATTA GCATTGCTGC GTGAATTAGG TGCTATGCCA TCCCTTATCC GTGATACTCA AGGCGAACCG CTGATCCCTG AGCATTGCTA TCAACTCGTG CCAGAACTTG GCTTTCAATT TGTGCTAAAC AGCCGAGCAA AGCACACCTA TCAAGGGGCG ATGTTAACCG CACTTAACGA TAATCAATTG TTGCAAGAGC AGTTTTTAGA GGCCAAACGA TTGATGCGTT CGATGTTGCA ACCTCTGCTC GGTAATAAGC CACTGGTGAG TCGACAATTG TTTATTCAGG CAGCAGCTTC AAAGGTAGAT GGGAATAATT AG
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Protein sequence | MKRGYVLHHR PYRESSALVN LLVDGIGRVD AVARVGSGKR SIKSILQPFQ PLIFEFSGKS ELKNISQIEA AAPAVPLSGY SLYAGMYINE LLMRTLSVQH NAEALFFIYH QALVGLAAQF CESKLRYLEL ALLRELGAMP SLIRDTQGEP LIPEHCYQLV PELGFQFVLN SRAKHTYQGA MLTALNDNQL LQEQFLEAKR LMRSMLQPLL GNKPLVSRQL FIQAAASKVD GNN
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