Gene SO_1349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1349 
Symbolera 
ID1169170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp1405603 
End bp1406622 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content48% 
IMG OID637343293 
ProductGTP-binding protein Era 
Protein accessionNP_716969 
Protein GI24372927 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAA AAACAGACTT GCCAGCAGTC GATGCCGCCA ATGCGAGCAA TGAGCCGAGC 
TTAGATGAAT TACTGGCAAG GATGAATGCT GCGAGCGCTG CGGCGCCGTC AGTGCACTAT 
GATGTAACCT ACTGTGGCAT GGTGGCCATT ATTGGGCGCC CAAACGTAGG TAAATCGACA 
TTGCTTAACC GTTTGCTCGG GCAAAAGATC AGTATTACCT CGAAAAAGCC GCAAACGACT 
CGTCATCGCA TCATGGGCAT TCATACCGAT GGCCCACGTC AGATCGTGTT TATCGATACA 
CCGGGCCTAC ATATCGAAGA GCAGCGTGCG ATTAACCGTT TAATGAACCG TGCCGCGGCA 
AGCTCTTTAG CCGATGTGTC TATGGTAATT TTTGTGGTCG ATGGTATGAC TTGGACCGCC 
GATGATGAGA TGGTGTTAAG CAAATTACGC CGCGGCGGTG AAGAGCGTAA AACCGTTTTA 
GCCATCAATA AAGTTGATAA TATCAAAGAT AAAGAAGCGC TTTTCCCTTA TTTGGAAGAC 
GTCGCTAAGA AGTATCCTTT CGATGAAATC CTGCCGATTT CAGCCAGTAA GGGCACCAAT 
GTTAAGCGGA TTTTAGAGTT GGCGGCGCAG TCTTTACCTG AAAATCCTTT CTTCTTTCCT 
GAAGACTATG TCACCGACCG TTCACAGCGT TTTATGGCCT CTGAAATCGT GCGTGAGAAA 
CTGATGCGCT TTTTAGGCGA TGAATTGCCT TACGATGCCA CGGTTGAAAT CGAGCAATTT 
AAGATGATGG AAAATGGCGT TTACCAAATT AACGCCCTGA TCCTCGTTGA GCGCGAAGGT 
CAAAAGCGGA TGGTGATTGG TAGCAAAGGT GAGCGTATTC GTACCATTGC GACTCAAGCC 
CGCCTCGATA TGGAAACCTT GTTTGATAAC AAGGTGTTCC TCGAAGTGTG GGTTAAGGTC 
AAATCCGGTT GGGCCGATGA TGAACGTGCC CTGCGAAGCC TAGGTTATGG TGACGATTAA
 
Protein sequence
MTKKTDLPAV DAANASNEPS LDELLARMNA ASAAAPSVHY DVTYCGMVAI IGRPNVGKST 
LLNRLLGQKI SITSKKPQTT RHRIMGIHTD GPRQIVFIDT PGLHIEEQRA INRLMNRAAA 
SSLADVSMVI FVVDGMTWTA DDEMVLSKLR RGGEERKTVL AINKVDNIKD KEALFPYLED 
VAKKYPFDEI LPISASKGTN VKRILELAAQ SLPENPFFFP EDYVTDRSQR FMASEIVREK 
LMRFLGDELP YDATVEIEQF KMMENGVYQI NALILVEREG QKRMVIGSKG ERIRTIATQA 
RLDMETLFDN KVFLEVWVKV KSGWADDERA LRSLGYGDD