| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1344 |
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| Symbol | rseB |
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| ID | 1169165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1400453 |
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| End bp | 1401385 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637343288 |
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| Product | sigma-E factor regulatory protein RseB |
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| Protein accession | NP_716964 |
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| Protein GI | 24372922 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3026] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGTCTAA TCCTGTTGGC TTTATTGGCC TTGGTATTTC CTGCGGTGGC GCAGGAAGAT
ATGCCTGCTA AAGTCTGGCT TGAGAAAATG AGCCAGGCTT TAAAAGAGAA AGAGTTCAAA
GCATCGATTA TACAACTTCA GGCCGATCAT ATTCGGCCTT TGGTTTATCT TCACGGTAAA
GTAAATAATC AAGAAGTCGC GTTTCTTGAA TACCTCAATG GCCCACCTAA AAACGCGGTG
CGTGTAGGCA ATCGAGTGAC CTTTATTGAG CATGACCAAC CCGCCTACAG TATCCTCTCT
AATCATATTC AGGGTGTATG GCCAGCAGCT TTTTCATCCC AAATGAGTGA TTTGGAAGTC
GGCTATCAAT TTGTGATGGG AGGCCGCACT CGTATTGCGG GGCGCCCTGG GCAAATGATT
CGTTTATTGC CTAATGACGA ATACCGATAT GGATTCCAAA TTTGGCTGGA TATGGACACT
TACCTGCCGC TCAGATATGA CATGTTGACT CAAGATAAGC AATTGCTTGA ACAACTAATG
GTGATTGAAT TAATTGAATT TAGCGAGCCG CCATCGATTT TACAGGAGGC TTACAAGCAA
GAATGGCCCG CGGTTATCGA TCAGGCTGAA CGTCAAGATG GACAAAATTG GCAGTTTTCT
TGGCTACCCG CAGGCTTTAG TGTGGTGGTG CGTGATCACC ATCGTTTGAT TGGCAGCCAT
GAGGCGGTTG AATATATTGC CTTAACCGAC GGTTTAGCCA ATATTTCTAT CTATGTTGCT
CGGGCTGGGT CAACGCCATT GCCTGAAGAG TTAATTACGC GCAATGGTCT GTCCTTGGTG
GCTGAAAAAG TCGGTAATGC CGAAGTGGTG GCTGTGGGTA AAGTGCCAAC AGAGACCTTA
GCCCGTATCG CAAAAAGTTT GATGTTAAAA TAG
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| Protein sequence | MRLILLALLA LVFPAVAQED MPAKVWLEKM SQALKEKEFK ASIIQLQADH IRPLVYLHGK
VNNQEVAFLE YLNGPPKNAV RVGNRVTFIE HDQPAYSILS NHIQGVWPAA FSSQMSDLEV
GYQFVMGGRT RIAGRPGQMI RLLPNDEYRY GFQIWLDMDT YLPLRYDMLT QDKQLLEQLM
VIELIEFSEP PSILQEAYKQ EWPAVIDQAE RQDGQNWQFS WLPAGFSVVV RDHHRLIGSH
EAVEYIALTD GLANISIYVA RAGSTPLPEE LITRNGLSLV AEKVGNAEVV AVGKVPTETL
ARIAKSLMLK
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