Gene SO_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1333 
Symbol 
ID1169154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1391447 
End bp1392214 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content45% 
IMG OID637343277 
Producthypothetical protein 
Protein accessionNP_716953 
Protein GI24372911 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTTTAG GTGCATTTGT TGGCTTTATG GCAGGATTAT TAGGTATCGG TGGCGGCTTG 
ATTGTGGTGC CAGCACTGCT TTATATTTTG CCATCGGTCG GTATTAGCTC TACTCAGCTC
CCCCATATTG CGATTGCCAC TTCGCTAGCC GCCATTATTC TCACTTCTAT TTCGTCGGCA
CGTGCCCACC ATAAGCGCGG TAATGTGCCT TGGGATTTAT TCAAATCAAT GTTACCGGGC
CTGATTATAG GCGCGCTGGC TTCAGGTTTT ATTGCTGAGC GTATTCCCGC TGATACTTTA
CAGAAAGGTT TTGCCATCTT TGTGATTTTA ATGACAATTC AAATGGCTTA TCCCGTTAAG
GCCGAATCAA ATCGTCAATT ACCTAATTCA GTAGTGCTTT TTGTTGTATC GGCTTTGGTT
GCGGTTTTGG CCGGTTTGAC AGGGATAGGT GGCGGTATAC TGATAGTGCC ATTTTTGACT
TTTTATGGTT TACAGATGCG TCAAGCCGTG GGTTTTTCTG CTGCGATGGG CTTCTTAATC
TCTCTTTCTG GCAGTTTCGG CTATATTATT GCAGGAATGA ATGCCCCTGA GTTGCCTTAT
GGTACCTTAG GCTATATCTA TTTACCTGCA TTGTTTGGTT TAGTTATCAC TTCTGTCTTG
ATGGCGCCCG TGGGCGTAAA AGCGGCGAGC ACTTGGCCAA CACCTGTACT TAAAAAGATA
TTTGCACTTT TGCTCCTTTG TGTCGGCCTC AAATTAATTC TGAGCTGA
 
Protein sequence
MALGAFVGFM AGLLGIGGGL IVVPALLYIL PSVGISSTQL PHIAIATSLA AIILTSISSA 
RAHHKRGNVP WDLFKSMLPG LIIGALASGF IAERIPADTL QKGFAIFVIL MTIQMAYPVK
AESNRQLPNS VVLFVVSALV AVLAGLTGIG GGILIVPFLT FYGLQMRQAV GFSAAMGFLI
SLSGSFGYII AGMNAPELPY GTLGYIYLPA LFGLVITSVL MAPVGVKAAS TWPTPVLKKI
FALLLLCVGL KLILS