Gene SO_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1330 
SymbolmutH 
ID1169151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1387210 
End bp1387881 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content46% 
IMG OID637343274 
ProductDNA mismatch repair protein 
Protein accessionNP_716950 
Protein GI24372908 
COG category[L] Replication, recombination and repair 
COG ID[COG3066] DNA mismatch repair protein 
TIGRFAM ID[TIGR02248] DNA mismatch repair endonuclease MutH 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTA TTATTCCCCC TCAAAATCTG AGCGAATTGC TCAAACGCGC TAATATGATG 
GCAGGCATTT CTTTGGCGCA AATTGCCACT CATCGCGGTA TTAATGTCCC CAACAACCTA 
AAACGCGATA AAGGTTGGGT TGGGCAACTC ATTGAAATGG AATTAGGTGC CACGGCAGGT 
TCCAAACCTG AGCAGGATTT TCTTCATCTT GGCGTTGAGC TAAAAACGAT TCCCATTGAT 
AACCATGGCA AGCCACTAGA AACCACTTAT GTATGTGTCG CGCCACTGAC CAACATCGAA 
GGGTTAACCT GGCAAAACAG CTTAGTGTGT CACAAGTTGC AGCGAGTATT GTGGGTACCT 
GTAGAGGGTG AGCGGCATAT TCCAGTGGGA GAGCGCCGCA TTGGCACGCC CACACTGTGG 
GAACCAGACC CGCAGGAGCA AGCATTACTG CAACAGGATT GGGAAGAAAT CATGGAATTG 
ATTGCCCTCG GTAAAGTAGA AAAACTCACA GCAAGGCATG GGGAAGTTCT CCAATTACGA 
CCCAAAGCCG CGAATAGTAA GGCGATGACT CACAGCATTT CAGAGGATGG TAGCTTAAAA 
ATGACTAATC CTCGGGGCTT TTATCTAAAA ACCGCTTTTA CAGCAATGAT ATTAAATAAG 
GTATTTGGTT AA
 
Protein sequence
MKSIIPPQNL SELLKRANMM AGISLAQIAT HRGINVPNNL KRDKGWVGQL IEMELGATAG 
SKPEQDFLHL GVELKTIPID NHGKPLETTY VCVAPLTNIE GLTWQNSLVC HKLQRVLWVP 
VEGERHIPVG ERRIGTPTLW EPDPQEQALL QQDWEEIMEL IALGKVEKLT ARHGEVLQLR 
PKAANSKAMT HSISEDGSLK MTNPRGFYLK TAFTAMILNK VFG