Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1328 |
Symbol | |
ID | 1169149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1385079 |
End bp | 1385993 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637343272 |
Product | LysR family transcriptional regulator |
Protein accession | NP_716948 |
Protein GI | 24372906 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATT TACCTAGCCT CAAGAATCTT TACTATTTGG TGAACCTTCA CCAAGAGCAG AATTTTAACC GCGCCGCTAA GGTGTGCTTT GTCAGTCAAT CCACATTGTC GAGCGGGATC CAGAATCTTG AAGAGCAGCT TGGTCATCAG TTGATTGAAC GTGACCATAA GTCTTTTATG TTCACTGCTA TCGGTGAAGA AGTCGTACAG CGTTCCCGTA AAATCCTTAC GGATGTCGAC GATTTAGTTG AACTGGTCAA AAACCAAGGC GAACCGATGA CAGGTGATAT CCGCTTGGGT TGTATTCCTA CCATTGCGCC GTTTCTACTC AGCCGAGTCG TTAAACAATG TCAGCAGGCG TACCCTGAGA TGAGTTTGTT ACTCAAAGAG GATACGACGG AACGTTTACT CGATGCCTTA GGTAAAGGGG AGTTAGATTT ACTTATTCTA GCTTTACCCG TTGATACTAG TGGTTACCAC AGCATGAAGG TCGGAATCGA TCCCTTTAAG ATGGTGATCC ATAAAGATTT AGTGGGTGGC ATCCATCAGC CTATCGATTA TCAGACATTA CCCGATGAAA GTATCTTTCT GTTGCAGAGT GAGCATTGTA TTACTGGCCA TGCGATTACC GCGTGTCAGC TCGGTGACAG TGCGAAGGTG AATCCGTTTG CGGCGACGAG TCTGCATACC TTAGTGCAAA TGGTCAACAG TAAACTGGGG ACGACGTTTT TACCACAAAT GGCGATTGAT GCTGGGATCT TAAATGATAC TGATCTGGTG GTGATGACTC CCCCTGGTGA AGCGCCATAT CGCGATATCG GTTTAGTTTG GCGACAAACG ACCAGCCGGA TTTTGACTTT CCGTACGCTA GGTTTATTGA TCCAAAAATT GTTAACGAAT GAAACGGCAC AATAA
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Protein sequence | MKNLPSLKNL YYLVNLHQEQ NFNRAAKVCF VSQSTLSSGI QNLEEQLGHQ LIERDHKSFM FTAIGEEVVQ RSRKILTDVD DLVELVKNQG EPMTGDIRLG CIPTIAPFLL SRVVKQCQQA YPEMSLLLKE DTTERLLDAL GKGELDLLIL ALPVDTSGYH SMKVGIDPFK MVIHKDLVGG IHQPIDYQTL PDESIFLLQS EHCITGHAIT ACQLGDSAKV NPFAATSLHT LVQMVNSKLG TTFLPQMAID AGILNDTDLV VMTPPGEAPY RDIGLVWRQT TSRILTFRTL GLLIQKLLTN ETAQ
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