Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1324 |
Symbol | gltD |
ID | 1169145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 1376934 |
End bp | 1378340 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637343268 |
Product | glutamate synthase subunit beta |
Protein accession | NP_716944 |
Protein GI | 24372902 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAACG ATTTTCAATT TATTGAAGTG GGTCGCAAAG ACCCAACCAA ACACCCTGCG GCAAAACGTT CGACTCAGTT TATTGAGATT TATCAGCCCT TTGCACAGGC TCAGGTGAGC GAACAAGCGG ATCGCTGTTT AGATTGTGGT AACCCTTACT GTGAGTGGAA GTGTCCACTG CACAACTACA TTCCTAACTG GCTAAAGCTC GCGCAACAGG GCCGGATTAT GGAGGCGGCA GATTTAGTCC ATGAGACCAA TACCCTGCCC GAAATTTGCG GCCGCGTCTG TCCACAGGAC AGACTCTGTG AAGGCGCCTG TACCCTAAAC GCCGACTTTG GCGCTGTGAC TATCGGTAAT GTGGAAAAAT ACATTACCGA TACCGCTATC GCCCAAGGCT GGCGTCCGGA TATGAGCAAG GTCACGCCAC GTAAAGAAAA GGTCGCGATT GTCGGCGCAG GACCAGCGGG TTTAGGCTGC GCCGATATTC TTGCCCGCAA TGGAGTAAAG GCTGTGGTGT TTGATAAGTA TCCCCAAATT GGTGGCCTGC TGACCTATGG TATCCCCGCC TTTAAACTGG ATAAAGCCGT AATGGCGACT CGCCGCACTG TGTTAGAAGG CATGGGCATT GAGTTCAAAC TGGGCGTAAC TGTCGGCAAG GACGTTGCCT TTAATCAATT GCTTGAGGAA TACGATGCCG TCTTCCTTGG CATGGGAACC TACACCGCCA TGAAAGCGGG CCTTGAGGGT GAAGATGCTC AAGGCGTTTA CCAAGCCCTG CCCTATTTGA TTGGTAATAC CCATCACCTG ATGGGCAGCA CAAGCCCTGA TATGCCTTAT CTTAACCTTG CCGGTAAACG CGTAGTGGTC TTAGGTGGCG GTGATACCGC CATGGATTGT GTTCGTACCG CCGTGCGCCA AGGTGCCAGC AGTGTAATTT GTGCCTATCG CCGTGATGAG GCCAACATGC CAGGTTCTCG CCGCGAAGTA CAAAATGCCC GTGAAGAGGG AGTGAACTTC CTGTTTAACC GTCAACCCGT GGCGATTAAA ACCCAGGATG GCAAAGTGCT AGGTGTGGAA TGCGTTGAAA CCCAGATGGG CAAGGCGGAT GCCAGTGGTC GTCAACGGGC CGAAGCGATT GTGGGCAGTG AGCAGTTACT CGAAGCCGAT GCAGTGATTA TCGCCTTCGG TTTCCAACCA AGCCCAGCGC CTTGGTTTGC CGATTACGGC ATTGAACTCG ACCAATGGGG CCGAGTAAAA GCCAGTAAAC AGGCCGATAA TCCTTTCCAA ACCACCAATC CCAAGGTATT TGCTGGCGGC GATATGGTAA GAGGCTCGGA CCTTGTCGTT ACCGCGATTG CCGAAGGACG GGATGCCGCG CAAGGCATTC TTAACTATCT GGATTAA
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Protein sequence | MSNDFQFIEV GRKDPTKHPA AKRSTQFIEI YQPFAQAQVS EQADRCLDCG NPYCEWKCPL HNYIPNWLKL AQQGRIMEAA DLVHETNTLP EICGRVCPQD RLCEGACTLN ADFGAVTIGN VEKYITDTAI AQGWRPDMSK VTPRKEKVAI VGAGPAGLGC ADILARNGVK AVVFDKYPQI GGLLTYGIPA FKLDKAVMAT RRTVLEGMGI EFKLGVTVGK DVAFNQLLEE YDAVFLGMGT YTAMKAGLEG EDAQGVYQAL PYLIGNTHHL MGSTSPDMPY LNLAGKRVVV LGGGDTAMDC VRTAVRQGAS SVICAYRRDE ANMPGSRREV QNAREEGVNF LFNRQPVAIK TQDGKVLGVE CVETQMGKAD ASGRQRAEAI VGSEQLLEAD AVIIAFGFQP SPAPWFADYG IELDQWGRVK ASKQADNPFQ TTNPKVFAGG DMVRGSDLVV TAIAEGRDAA QGILNYLD
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