Gene SO_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1324 
SymbolgltD 
ID1169145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1376934 
End bp1378340 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content52% 
IMG OID637343268 
Productglutamate synthase subunit beta 
Protein accessionNP_716944 
Protein GI24372902 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases 
TIGRFAM ID[TIGR01318] glutamate synthase small subunit family protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACG ATTTTCAATT TATTGAAGTG GGTCGCAAAG ACCCAACCAA ACACCCTGCG 
GCAAAACGTT CGACTCAGTT TATTGAGATT TATCAGCCCT TTGCACAGGC TCAGGTGAGC
GAACAAGCGG ATCGCTGTTT AGATTGTGGT AACCCTTACT GTGAGTGGAA GTGTCCACTG
CACAACTACA TTCCTAACTG GCTAAAGCTC GCGCAACAGG GCCGGATTAT GGAGGCGGCA
GATTTAGTCC ATGAGACCAA TACCCTGCCC GAAATTTGCG GCCGCGTCTG TCCACAGGAC
AGACTCTGTG AAGGCGCCTG TACCCTAAAC GCCGACTTTG GCGCTGTGAC TATCGGTAAT
GTGGAAAAAT ACATTACCGA TACCGCTATC GCCCAAGGCT GGCGTCCGGA TATGAGCAAG
GTCACGCCAC GTAAAGAAAA GGTCGCGATT GTCGGCGCAG GACCAGCGGG TTTAGGCTGC
GCCGATATTC TTGCCCGCAA TGGAGTAAAG GCTGTGGTGT TTGATAAGTA TCCCCAAATT
GGTGGCCTGC TGACCTATGG TATCCCCGCC TTTAAACTGG ATAAAGCCGT AATGGCGACT
CGCCGCACTG TGTTAGAAGG CATGGGCATT GAGTTCAAAC TGGGCGTAAC TGTCGGCAAG
GACGTTGCCT TTAATCAATT GCTTGAGGAA TACGATGCCG TCTTCCTTGG CATGGGAACC
TACACCGCCA TGAAAGCGGG CCTTGAGGGT GAAGATGCTC AAGGCGTTTA CCAAGCCCTG
CCCTATTTGA TTGGTAATAC CCATCACCTG ATGGGCAGCA CAAGCCCTGA TATGCCTTAT
CTTAACCTTG CCGGTAAACG CGTAGTGGTC TTAGGTGGCG GTGATACCGC CATGGATTGT
GTTCGTACCG CCGTGCGCCA AGGTGCCAGC AGTGTAATTT GTGCCTATCG CCGTGATGAG
GCCAACATGC CAGGTTCTCG CCGCGAAGTA CAAAATGCCC GTGAAGAGGG AGTGAACTTC
CTGTTTAACC GTCAACCCGT GGCGATTAAA ACCCAGGATG GCAAAGTGCT AGGTGTGGAA
TGCGTTGAAA CCCAGATGGG CAAGGCGGAT GCCAGTGGTC GTCAACGGGC CGAAGCGATT
GTGGGCAGTG AGCAGTTACT CGAAGCCGAT GCAGTGATTA TCGCCTTCGG TTTCCAACCA
AGCCCAGCGC CTTGGTTTGC CGATTACGGC ATTGAACTCG ACCAATGGGG CCGAGTAAAA
GCCAGTAAAC AGGCCGATAA TCCTTTCCAA ACCACCAATC CCAAGGTATT TGCTGGCGGC
GATATGGTAA GAGGCTCGGA CCTTGTCGTT ACCGCGATTG CCGAAGGACG GGATGCCGCG
CAAGGCATTC TTAACTATCT GGATTAA
 
Protein sequence
MSNDFQFIEV GRKDPTKHPA AKRSTQFIEI YQPFAQAQVS EQADRCLDCG NPYCEWKCPL 
HNYIPNWLKL AQQGRIMEAA DLVHETNTLP EICGRVCPQD RLCEGACTLN ADFGAVTIGN
VEKYITDTAI AQGWRPDMSK VTPRKEKVAI VGAGPAGLGC ADILARNGVK AVVFDKYPQI
GGLLTYGIPA FKLDKAVMAT RRTVLEGMGI EFKLGVTVGK DVAFNQLLEE YDAVFLGMGT
YTAMKAGLEG EDAQGVYQAL PYLIGNTHHL MGSTSPDMPY LNLAGKRVVV LGGGDTAMDC
VRTAVRQGAS SVICAYRRDE ANMPGSRREV QNAREEGVNF LFNRQPVAIK TQDGKVLGVE
CVETQMGKAD ASGRQRAEAI VGSEQLLEAD AVIIAFGFQP SPAPWFADYG IELDQWGRVK
ASKQADNPFQ TTNPKVFAGG DMVRGSDLVV TAIAEGRDAA QGILNYLD