Gene SO_1315 details

Gene Information

• Locus tag: SO_1315
• Symbol: tyrS
• ID: 1169137
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 1371199
• End bp: 1372395
• Gene Length: 1197 bp
• Protein Length: 398 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637343260
• Product: tyrosyl-tRNA synthetase
• Protein accession: NP_716935
• Protein GI: 24372893
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0162] Tyrosyl-tRNA synthetase
• TIGRFAM ID: [TIGR00234] tyrosyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGATT TAGACCAAGT ATTAGCAGAA ATTAGACGTG GTACCGACGA GATTTTACTC 
GAATCGGATC TGCTGGAAAA ACTCAAAAAA GGACGTCCAC TTCGTATCAA GTTAGGCGCA 
GATCCTACCG CACCGGATAT CCATCTTGGA CACACAGTAA TTTTAAATAA ATTAAGATTA 
TTCCAAGAGT TAGGTCATGA GGTCATTTTT TTAATTGGTG ACTTTACCGG TATGGTGGGA 
GACCCAAGTG GTAAAAATAG CACTCGTCCG CCACTGACCC GTGAGCAAGT GTTGGCCAAC 
GCCGAGACCT ACAAAGAGCA GGTCTATAAA ATTCTTGACC CAGCAAAAAC CCGTATCGAG 
TTCAACTCGA GTTGGTTAGA GCCATTGGGC GCGGCCGGTA TGATCCGTTT AGCCTCGCAG 
CAAACCGTTG CTCGTATGAT GGAACGTGAT GACTTTAAGA AGCGTTATGC GTCGGGCCAA 
TCGATTGCTA TCCACGAATT TATGTACCCG CTGCTACAGG GCTATGACTC TGTAGCCCTC 
AAGGCCGACG TTGAATTAGG CGGTACAGAC CAGAAGTTCA ACCTGTTAAT GGGTCGTGAG 
TTACAGAAAG CCGAAGGTCA AAAACCACAA GCCGTGATTA TGATGCCACT GCTTGAAGGT 
TTAGACGGTG TGAAGAAAAT GTCTAAATCG GCGCACAACT ACATTGGTGT GAGTGAACCT 
GCCAATGAGA TGTTTGGCAA AATCATGTCT ATTTCTGACG AGCTGATGTG GCGCTACTTT 
GAGTTGTTGT CATTCCGTCC TCTGGCCGAG ATTGAGCAAT TCAAACAAGA TATAGCCAAT 
GGCGCTAACC CTCGTGATAC CAAGATTAGC TTAGCGAAGG AAATTATCGC GCGCTTCCAT 
GACGCAGCGG CAGCCGAAAG TGCCCATCAA GCCTTTATCG ACCGTTTCCA AAAGGGCGCT 
ATTCCTGATG ATATCCCTGA GGTTGAATTA GCAGCGGGTG AAGGCTTAGC AATTGCTAAC 
TTACTCAAGG ATGCTGACCT AGTCGGCTCG ACTTCAGATG CGTTGCGGAT GATTAAGCAA 
GGCGCTGTGA AGATGGACGG TGAGAAGATT GATGATAGCC GTATGACGCT GAGCGCAGGT 
ACCGTTGCGG TATTCCAAGT GGGTAAGCGT AAGTTTGCTA AAGTGACTTT GGTTTAA 

 

Protein sequence

MADLDQVLAE IRRGTDEILL ESDLLEKLKK GRPLRIKLGA DPTAPDIHLG HTVILNKLRL 
FQELGHEVIF LIGDFTGMVG DPSGKNSTRP PLTREQVLAN AETYKEQVYK ILDPAKTRIE 
FNSSWLEPLG AAGMIRLASQ QTVARMMERD DFKKRYASGQ SIAIHEFMYP LLQGYDSVAL 
KADVELGGTD QKFNLLMGRE LQKAEGQKPQ AVIMMPLLEG LDGVKKMSKS AHNYIGVSEP 
ANEMFGKIMS ISDELMWRYF ELLSFRPLAE IEQFKQDIAN GANPRDTKIS LAKEIIARFH 
DAAAAESAHQ AFIDRFQKGA IPDDIPEVEL AAGEGLAIAN LLKDADLVGS TSDALRMIKQ 
GAVKMDGEKI DDSRMTLSAG TVAVFQVGKR KFAKVTLV