| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1309 |
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| Symbol | |
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| ID | 1169131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1359989 |
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| End bp | 1363012 |
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| Gene Length | 3024 bp |
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| Protein Length | 1007 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637343254 |
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| Product | TonB-dependent receptor |
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| Protein accession | NP_716929 |
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| Protein GI | 24372887 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA AACTATTGAC CTTAGCAATA CAAGCATCAA TGTTTGGTAT TGTTCCTTCG
GTAGCATGGG CTGCCGAACC GATAGAAGTG AAAGCAGTTA AGGAAAATGC GACTCGAAAT
GAAACCGAAA CCGCGGATAA AAACGATGGC ATCGAAAAGG TCACGGTAAC GGGTTCGCGG
ATTAAGCGAG ATAGTTTTTC ATTAAGTACG CCTTTACAGG GCTTGGATGC CAAGGATATC
GCCGATAGCG GTATCGGCTC ATTGGCGGAT ATTTTAGTTG ACCAAATTCC GGCCTTGGCG
GAAGGGGTGA GTAGCACTAA TAGCCAATCG AGTGTGCAAA ATACCGGCCT ATCAACCATT
GACCTACGTA ACTTAGGTAC GGATCGTACC TTAACCCTTA TTGATGGTCG TCGCGTTGTT
TCTAACAGTT ACAGTGGTAA CTACGTCAGT TTAAGTACGA TTCCAGCAGC CATGGTCGAT
AAGGTCGAAA TCATTACTGG CGGTGCATCT GCTGTGTATG GTTCGGATGC GATTGCAGGC
GTGGTCAATA TTATCACCCA GCAAAACAAG ACTGGGTTTG AGATTAACGC CCGTGGTGGT
GAAACGACTG AAGGTGGCGG CCGTGAAACC ACAGTTGATG CTGGTTATGG TGCTGATTTC
AATAGTGATA AAGGTTACAT TTACGCCAGT GCTACCTATG ATAAACAGCA TGGGTTATTC
GCCACTGACA GGGAACGAGC CCTGTATGAA TCAAGCTTTG CCTACGATAA AAAGCAAATG
TGTAACACCA TGAATACCGC TGATGGTTAT CAGTGTATGC GGGATATCAC TCCGGAAGAT
TGGCGTGAGC GCAGCAACGA TATCGTTGGT GGCCGCTTTA AGTCGAACGC TTGGTGGTAC
GATGGCACTG AACTTAAAAC TGACTTCAAA GAAGAACGTG ATGGTTATAA CGGTTATACC
ACGGGTCTAT TGAAGGTGCC TGAGGATACC TTGGCGACAG CGGTCAAAGT AAACTATGAC
CTTAGTGAAA GTGTTCGTGC GAATGCACAA GTACAATTTA GTCGTAATAC TGCGTTTCGC
CGTACCGACG CAGAAGGTCA AGACTATAAC GATGCTGAGC TGTATATCGA TCCCATCACT
GGGTTACCAG GGATGATTGA TGCGGGCAGT ATTTTAGCCA ATAACCCTTA TATACCCGCT
GAAATTGCCG CGACAGGGGG GAAAAGTATT ACCTGGGATC GTCGTTTCGA AGAGGTTGGG
CCTGTTGAAA GTGATAACGA GCGTACCACG CTGCGTACTT GGGCGGGTTT ACAGGGGGAT
TTGTTTGAAA CTTGGACTTG GGATGCGTCA GTGGGCTACG GTCAGTTCGA GCAGCGTCAA
CGCCGTAGCA ATGAGATCAG CATTCGTCGT TTAAGAAATG CCTTGAATGC CGTATATGCC
GCTGATGGTG TCACTATTCA ATGTGCCAGC GAAGCCGCCA GAGCTGAAGG CTGTGTGCCC
GTCAATATCT TTGGTGAAGG CTCTATCAGC AAGGAAGGGG CGGACTATAT TCGCGCTAAT
CCCTATATCA ATACCGATAT CACTCAATTC AATGCGTTAG GGTATATTTC TGGCGAGTTG
TTTGAGCTCC CTGCGGGTGG TGTGCAATCG GCATTCGGGA TGGAGTATCG CCGTGATACG
CAGGCTGTCG ATACCGATAA GGCGATGCGT GGTGATGCGA TTACCTTTAA CGATGTTCCT
CCCTTTGAAG GTGATGTCAC CGTATGGGAA GCCTTTGGTG AGGCGAATCT ACCCTTATTA
AGGGATATGA GCTTCGCTAA TAAGCTTGAT GTGGATGTGT CCTTGCGTCT TGCGGATTAC
AGTCAGAAAA ACATTGATTT AATGTCGAGC TACCGTACCG GCATACTGTG GGAACCCATT
GCAAACTATG CTTTACGTGC CAACTACTCA CGTTCACAAC GTGCGCCGAA TATCACTGAG
CTCATCTCTC CACCCCGTGG TGATTACGAC AGTATTCGCG ATATTTGTAA TGGTGTGACG
GCAACCTCAA CAGGCGCTGG GCATGATAGC TGTCGTCTCG ATCCTGGGAT TGCTGTGGCT
ATTGCGAGTA CTGGCACCTT TAAGGCGGAA ACGGGCTCTA AGTATTCTCC TAACGCAGGT
AATGAAAACC TGACCGAAGA AACGGCGGAT ACCTACACCT TAGGTTTTAC CATGGCGCCA
GCCTTCCTTG AAGGCTTTAA CCTCGCGGTT GATTATTACG ATATCAAAGT TGCTGATGCT
ATTGGTTCAT TAAGCAACGA GGACATTCTG GCTGAGTGTT ATAACTCGAG TAATCCTTAT
GGTGCAGGTA ATGAGTACTG TCAGGATATC ACTCGTGATA CTGAGGGCCA AATCACCCAG
GTTATTCAGC AGGAACTGAA CCTGAATGAC ATAGTTACTC GTGGTATCGA CTTCGCAATG
GCCTACGAGT GGGAACTGGC TGATTATGGT GAACTGAGCT TAAACACTAA CTGGACCCAC
GTGTTGGAAT ACAGCTCAAG TTACTACGGC GCTGATGGTT TAGTGGCAGA GGATTATGTG
GGTGAGCTTA CTAGCGGGAT TTTTGAAGAC CGAGGCACGC TGTCATTAAC GTGGAGTAAC
GATGATTGGC GTGTGCGTTG GAGCGCGAAG TATAAGAGCG CAATGGTTGA TAGCCATGAC
CGAGTTGAAG AATGGAATGT GCTGAAAGCC GAAAACCAAG CCAAACTCGA CGCCGGTGAT
GCCAGTGCTG TGGCGAACCC AGAAACGCCA GAGTTCTTGT TCTATGGCTC GTATATCACT
CATGATTTGT CAGTGTCTTA CACCATGGAC GTGAGTCAGG CTGAATTACG TTTATACGGC
GGTTTACGCA ATATTTTCGA CAACCAAGGT CCTTGGGTCG CTGATGGTGG CGACTTAATT
GAAACGGGTA CCGGTAACTA CAGCAGTGCC TACGGCGGTG GTGTAGGGCG TTATGCCTAC
CTAGGTGCAG AGCTTAAGTT CTAA
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| Protein sequence | MKKKLLTLAI QASMFGIVPS VAWAAEPIEV KAVKENATRN ETETADKNDG IEKVTVTGSR
IKRDSFSLST PLQGLDAKDI ADSGIGSLAD ILVDQIPALA EGVSSTNSQS SVQNTGLSTI
DLRNLGTDRT LTLIDGRRVV SNSYSGNYVS LSTIPAAMVD KVEIITGGAS AVYGSDAIAG
VVNIITQQNK TGFEINARGG ETTEGGGRET TVDAGYGADF NSDKGYIYAS ATYDKQHGLF
ATDRERALYE SSFAYDKKQM CNTMNTADGY QCMRDITPED WRERSNDIVG GRFKSNAWWY
DGTELKTDFK EERDGYNGYT TGLLKVPEDT LATAVKVNYD LSESVRANAQ VQFSRNTAFR
RTDAEGQDYN DAELYIDPIT GLPGMIDAGS ILANNPYIPA EIAATGGKSI TWDRRFEEVG
PVESDNERTT LRTWAGLQGD LFETWTWDAS VGYGQFEQRQ RRSNEISIRR LRNALNAVYA
ADGVTIQCAS EAARAEGCVP VNIFGEGSIS KEGADYIRAN PYINTDITQF NALGYISGEL
FELPAGGVQS AFGMEYRRDT QAVDTDKAMR GDAITFNDVP PFEGDVTVWE AFGEANLPLL
RDMSFANKLD VDVSLRLADY SQKNIDLMSS YRTGILWEPI ANYALRANYS RSQRAPNITE
LISPPRGDYD SIRDICNGVT ATSTGAGHDS CRLDPGIAVA IASTGTFKAE TGSKYSPNAG
NENLTEETAD TYTLGFTMAP AFLEGFNLAV DYYDIKVADA IGSLSNEDIL AECYNSSNPY
GAGNEYCQDI TRDTEGQITQ VIQQELNLND IVTRGIDFAM AYEWELADYG ELSLNTNWTH
VLEYSSSYYG ADGLVAEDYV GELTSGIFED RGTLSLTWSN DDWRVRWSAK YKSAMVDSHD
RVEEWNVLKA ENQAKLDAGD ASAVANPETP EFLFYGSYIT HDLSVSYTMD VSQAELRLYG
GLRNIFDNQG PWVADGGDLI ETGTGNYSSA YGGGVGRYAY LGAELKF
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