| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1300 |
|---|
| Symbol | hemL |
|---|
| ID | 1169123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 1352002 |
|---|
| End bp | 1353294 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637343246 |
|---|
| Product | glutamate-1-semialdehyde aminotransferase |
|---|
| Protein accession | NP_716920 |
|---|
| Protein GI | 24372878 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
|---|
| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGTT CCGAAGCGCT ATTTGAACAG GCTAAAAAAA CCATCCCCGG CGGTGTTAAC
TCTCCGGTTC GTGCTTTTAA TGGTGTAGGT GGTTCCCCCC TGTTTATTGA AAAAGCCGAT
GGCGCTTATA TCTACGATGC CGATGGCAAA GCCTATATCG ACTATGTCGG TTCTTGGGGC
CCGATGATCC TCGGCCACAA TCATCCGAAG ATCCGTGAAG CAGTGCTGGC TGCAGTACAC
AATGGCCTGT CTTTTGGCGC GCCAACTGAG CTTGAAGTGC AAATGGCCGA AAAAGTGATT
GCGATGGTGC CCTCGATTGA GCAAGTCCGT ATGGTCAGCT CTGGTACTGA AGCGACCATG
AGTGCGATTC GCTTAGCGCG CGGTTTTACT AATCGTGACA AGATCTTAAA GTTTGAAGGT
TGCTACCATG GCCACGCTGA CTGCCTATTA GTTAAGGCGG GGTCTGGTGC ATTAACCTTA
GGCCAACCCA GCTCACCCGG CATCCCTGAA GATTTCGCAA AGCACACCTT AACTGCCGTG
TATAACGATC TGGATTCTGT TCGTAGCCTA TTCGAGCAAT ATCCAACTGA GATTTCTTGC
ATCATCATCG AGCCCGTTGC TGGCAACATG AACTGCATCC CACCTATTCC AGGCTTCCTC
GAAGGTCTGC GTAGCCTGTG TGATGAGTTT GGTGCGCTGC TGATTATCGA CGAAGTGATG
ACAGGGTTCC GAGTTTCAAA AAGCGGTGCT CAAGGTCACT ATGGCGTTAC GCCAGACTTA
ACCACTCTCG GTAAAGTCAT CGGTGGCGGT ATGCCAGTAG GTGCATTTGG TGGTCGTAAA
GATGTGATGC AGTTTATCGC ACCAACAGGT CCTGTATACC AAGCAGGTAC GCTTTCAGGT
AACCCAATTG CGATGTCAGC GGGTCTAGCG CAAATGGAAG CATTGTGTGA AGAAGGACTG
TACGAAGCCC TAAGCGCTAA AACCAAGCGC ATCGCCGAAG GCTTTAAAGC GGCGGCGGAT
AAGCACGGCA TCCCAATGGC AATCAACTAT GTTGGCGGTA TGTTCGGCTT CTTTTTTACC
GAGCAAGAGC ACATCACACG CTTCGACCAA GTGACTAAGT GCAATATTGA GCACTTCCGT
ACTTTCTACC ATGGCATGTT AGATGAAGGC GTTTACTTAG CACCAAGTGC CTATGAAGCA
GGCTTCCTGT CGATGGCCCA TGGTGAAGAA GAGCTGCGCC TCACACTTGA AGCTGCCGAC
CGTGTCTTAG CTCGCATGAA AGCGGCAAAC TAA
|
|---|
| Protein sequence | MTRSEALFEQ AKKTIPGGVN SPVRAFNGVG GSPLFIEKAD GAYIYDADGK AYIDYVGSWG
PMILGHNHPK IREAVLAAVH NGLSFGAPTE LEVQMAEKVI AMVPSIEQVR MVSSGTEATM
SAIRLARGFT NRDKILKFEG CYHGHADCLL VKAGSGALTL GQPSSPGIPE DFAKHTLTAV
YNDLDSVRSL FEQYPTEISC IIIEPVAGNM NCIPPIPGFL EGLRSLCDEF GALLIIDEVM
TGFRVSKSGA QGHYGVTPDL TTLGKVIGGG MPVGAFGGRK DVMQFIAPTG PVYQAGTLSG
NPIAMSAGLA QMEALCEEGL YEALSAKTKR IAEGFKAAAD KHGIPMAINY VGGMFGFFFT
EQEHITRFDQ VTKCNIEHFR TFYHGMLDEG VYLAPSAYEA GFLSMAHGEE ELRLTLEAAD
RVLARMKAAN
|
|---|
| |