Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1294 |
Symbol | |
ID | 1169113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1344013 |
End bp | 1344840 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637343238 |
Product | ribosomal RNA large subunit methyltransferase A, putative |
Protein accession | NP_716916 |
Protein GI | 24372874 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCTTC TATTTCAATG CCCGACCTGT GGTTTGGCGC TGATGCAACA TCAGGCATCC CAAGGTTTTT ATTGTGCTAA CAAGCACCAT TTTGATAAGA ATGCAGCAGG GTATTGGGTA TTCACAAAGC CCGCTCGTCA AAAACCAACT GGGGATAGTC GTCAACAGGT AAGAGCTAAA CACTTCTTGC TTGAGTCGGG AGTTTTTACG CCCTTGATCG ACAAAATAGG CGAGATGATC GCAGCACATT TACAGCCGAA TGATTGCCTG TTGGATTACG AGTGTGCGGA AGGCTTCTAT TTACGCGCGT TATCTTCGAC GCTGTCTAAA CTGACCAATG GAATAAATGT CCAGTACACT GGTGTTGCAG ACGCGGAAAA TACCATTTTT GCTGCCGCTA AAGCGCAAAC GCCTGCGGCG CTCTGTTTAA CTACATCCAA GGTATTACCT TTTGCTGATA ATTGTCTCGA TTTTATCACT GTGGTAGATA GACCGTTGAA GGGCAAAGAA TGTGTACGCA TTCTTAAAGA GCAGGGATTT ATGTTGCAGG TGATCCCCGG CGCTCGACAT CTGTGGCAAA TTAAAGCTCT CATTTATCCC GAACTCGCTG AAAAATCCGT CCAAGTAAAC CTGCCTTCTG GGTTAACGGT GAAAGAACAG CAGCGATTAC AATTCAGTTT GTCAGTGACG GGTGAACAAG CGTTAGTATT ACTCGATATG ACGCCCTACG CATGGCGCGC ATCGGATAAA GTAAAACACC TTATTCGGAG CCAAGCATTC GATAAGCTAG AAATCGATTT TACTTTAGTC CTAGCGCAAA AGTTATAA
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Protein sequence | MSLLFQCPTC GLALMQHQAS QGFYCANKHH FDKNAAGYWV FTKPARQKPT GDSRQQVRAK HFLLESGVFT PLIDKIGEMI AAHLQPNDCL LDYECAEGFY LRALSSTLSK LTNGINVQYT GVADAENTIF AAAKAQTPAA LCLTTSKVLP FADNCLDFIT VVDRPLKGKE CVRILKEQGF MLQVIPGARH LWQIKALIYP ELAEKSVQVN LPSGLTVKEQ QRLQFSLSVT GEQALVLLDM TPYAWRASDK VKHLIRSQAF DKLEIDFTLV LAQKL
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