| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1271 |
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| Symbol | |
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| ID | 1169091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1319668 |
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| End bp | 1320804 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637343216 |
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| Product | polyamine ABC transporter, ATP-binding protein |
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| Protein accession | NP_716894 |
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| Protein GI | 24372852 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAGCA CCTCGGGCGT CACCAATAAA CCCACAACAA AGACGCAAGA AAAAGTCCTG
CTTAAGATTG AGCGGGTGAG TAAGTTATTT GACGATGTAC GCGCGGTTGA TGACGTATCA
TTGACGATCA ATAAAGGTGA GATTTTTGCC TTACTTGGGG GCTCAGGCTC TGGTAAGTCG
ACCTTATTAC GCATGCTCGC TGGATTTGAA AGACCAACAA GTGGCCGGAT TTATCTTGAT
GGCGAAGATA TTACCGATCT GCCGCCTTAC GAGCGCCCTA TCAACATGAT GTTCCAATCC
TATGCACTGT TTCCCCATAT GACAGTGGCA CAAAATATTG CCTTCGGATT AAAGCAAGAT
AAGTTGCCTA AAGCTGAAAT TGAGCAGCGC GTACAGGAAA TGCTCAAGTT GGTGCATATG
GAGCAATACG GAAAACGAAA ACCCCATCAA CTTTCTGGCG GTCAGCGCCA ACGGGTCGCC
TTGGCACGCT CTTTGGCAAA ACGCCCCAAA TTATTATTGC TCGACGAGCC AATGGGCGCG
CTCGATAAAA AACTGCGTAC CCAGATGCAG CTAGAAGTGG TTGAAATCCT TGAGCGCGTT
GGTGTGACAT GTGTGATGGT GACCCACGAT CAAGAAGAAG CCATGACCAT GGCGGGGCGG
ATTTCAATTA TGAGTGATGG CTGGATAGCC CAAACTGGCT CTCCTATGGA TATCTACGAG
AGTCCAAATA GCCGCATGAT TGCTGAATTT ATTGGCTCTG TGAACCTGTT TAGTGGTGAG
ATTGAAGTGG ACGAAGTCGA CCATCTCATC ATTAAGCCTA ATGATTTAGC GCGATCTTTC
TATGTAGGTT ACGGTGTGAC CACCAGCCTT GAAGATAAAC GTGTATGGCT AGCAGTGCGC
CCTGAAAAAA CCATTATTAG TCGTGAGCAA CCTGAAGGTG AATACAACTG GGCCAAAGGT
ATAGTGCATG ATATTGCTTA TTTAGGCGGG ATTTCGGTTT ACTACATTCG CCTTGAAAAT
GGGCAGATTG TGCAGTGCAG TATGACAAAC CGTGAACGCC GCGCTGACCA TGCAACCTGG
GATGATGAAG TGTTCATCAG TTGGGAGGAC ACCAGTGGCG TGGTGTTAAG ATCATGA
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| Protein sequence | MASTSGVTNK PTTKTQEKVL LKIERVSKLF DDVRAVDDVS LTINKGEIFA LLGGSGSGKS
TLLRMLAGFE RPTSGRIYLD GEDITDLPPY ERPINMMFQS YALFPHMTVA QNIAFGLKQD
KLPKAEIEQR VQEMLKLVHM EQYGKRKPHQ LSGGQRQRVA LARSLAKRPK LLLLDEPMGA
LDKKLRTQMQ LEVVEILERV GVTCVMVTHD QEEAMTMAGR ISIMSDGWIA QTGSPMDIYE
SPNSRMIAEF IGSVNLFSGE IEVDEVDHLI IKPNDLARSF YVGYGVTTSL EDKRVWLAVR
PEKTIISREQ PEGEYNWAKG IVHDIAYLGG ISVYYIRLEN GQIVQCSMTN RERRADHATW
DDEVFISWED TSGVVLRS
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