Gene SO_1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1265 
Symbol 
ID1169086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp1313430 
End bp1313978 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content45% 
IMG OID637343211 
Producttranscriptional regulator, putative 
Protein accessionNP_716888 
Protein GI24372846 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG0662] Mannose-6-phosphate isomerase
[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATATTG GAGCCAGTCT CAGAACTGTT CGAAAAATGA AAGGCTTATC CCAACGCGAG 
TTGGCTAAGC GTGCTGGTGT GACTAACAGT ACCATTTCAA TGATCGAAAA AAACAGTGTT 
AGCCCATCCG TCAGTTCTTT GAAAAAAGTA TTGTCGGGTA TCCCTATGTC TTTAGTCGAT 
TTTTTTTCAA TTGAAGCATC AAGTGAGTGC GAGCAAAAAG TGGTTTATCG TTCTGATGAA 
CTCCTCAACA TAGGTACAGG GCCATTAGAA TTTAAATTGA TTGGTCGCGA TTACCCTAAT 
CGCGCCATGT CGGTGATGAG CGAAACCTAT CCTCCTGGTT CAGATACGGG CGAGGAAATG 
CTGAAGCACG AGGGGGAAGA AGCTGCCATG GTGGTTGAAG GCAGGTTTGA GCTTACCGTA 
GGTGATGAGG TGTATATTTT AGAAGCGGGC GATAGTTACT ACTTTAACAG TGAGTTACCC 
CATCGATTTC GCAATCCTTT CGATGAACCT TGTCGGCTGG TCAGTGCGAC AACCCCAGCT 
AATTTCTAA
 
Protein sequence
MDIGASLRTV RKMKGLSQRE LAKRAGVTNS TISMIEKNSV SPSVSSLKKV LSGIPMSLVD 
FFSIEASSEC EQKVVYRSDE LLNIGTGPLE FKLIGRDYPN RAMSVMSETY PPGSDTGEEM 
LKHEGEEAAM VVEGRFELTV GDEVYILEAG DSYYFNSELP HRFRNPFDEP CRLVSATTPA 
NF