Gene SO_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1239 
Symbol 
ID1169064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1290455 
End bp1291513 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content49% 
IMG OID637343189 
Producthypothetical protein 
Protein accessionNP_716862 
Protein GI24372820 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGGAG CCAACTACAG AGGGCTTGAT CGCACGCTTA TCGACGCACT CAAGGCTCCC 
CGCAACTCTC CCTACAACTC TTCCTACAAT GCTCCATCCA GTGTTAACGC CACTTCCTTC
TCAACACCAC ATATTGCCAA CGCCAGCAAC GCCGCAAACT GCCATACAAT TACAGTCAAC
GCCCTTTGGT TATCGGATAT TCATCTAGGT TGTAAGGATT GTAAGGCCGA CTATCTGTTA
AGCCTGTTAA CTACCGTGCG TTGCCAGCAC TTGTATCTGG TCGGCGATAT TGTCGATTTG
TGGGCACTCA AACGTCGTCT ACATTGGCCA GAAAGCCACA ATAAGGTGCT ACAAAAGATT
ATCGAGCTGG CGCAAAACGG CACTCAAGTG ATCTATCTGC CGGGTAACCA CGATGAACTG
ATTAAACCCT ATGCCGAACT GACCCTGCTG AATATCAAAA TTGCTCGGCA ACATATTCAT
CAGGGTATTG GCGGCCACAA GCTGTTAATG CTGCATGGCG ATCAGTTCGA TGCCGATGTT
TGCGTTGGGC GCTTTTACAC CATCTTAGGC GATCACCTCT ACGATTTTCT GCTGTTTCTC
AATCGCAATC TCCATCGCCT GCGTGAGCGT TTAGGCTACC CGTATTGGTC ACTCGCCAGC
TATATCAAAT CCCGCGTTGG CAAGGCTCAA ACAGCGATTT CACGCTACCG CCAAGCCGTT
GTGCAATATG CCCAGCACTA TGATGTCGAT GGCGTGATCT GCGGCCATAT TCATCAACCA
GAGTTATCAA TCCAGCCAAG GGATAACCAA TACACTACCC CAAACAAACG CCAGATCATT
TACGCCAATG ATGGTGATTG GGTCGAAAAC TGCAGCCTGA TCACCGAAAC CTTAAGCGGT
GAATTACAGC TCTGTCGCTG GAATGAGCAG TCCTTAAGCC TTGAGATACT GAGCAGTATT
GTCCTCCTCC AAACGCCGCC AACAACACCC CATCACGCCA CAGCAACTTT CAAATACAAC
TCCCAACAAC CACAAGTCCA ACCTAGGGAT GTCGCTTAA
 
Protein sequence
MTGANYRGLD RTLIDALKAP RNSPYNSSYN APSSVNATSF STPHIANASN AANCHTITVN 
ALWLSDIHLG CKDCKADYLL SLLTTVRCQH LYLVGDIVDL WALKRRLHWP ESHNKVLQKI
IELAQNGTQV IYLPGNHDEL IKPYAELTLL NIKIARQHIH QGIGGHKLLM LHGDQFDADV
CVGRFYTILG DHLYDFLLFL NRNLHRLRER LGYPYWSLAS YIKSRVGKAQ TAISRYRQAV
VQYAQHYDVD GVICGHIHQP ELSIQPRDNQ YTTPNKRQII YANDGDWVEN CSLITETLSG
ELQLCRWNEQ SLSLEILSSI VLLQTPPTTP HHATATFKYN SQQPQVQPRD VA