| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1236 |
|---|
| Symbol | |
|---|
| ID | 1169061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 1286657 |
|---|
| End bp | 1288009 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637343186 |
|---|
| Product | xanthine/uracil permease family protein |
|---|
| Protein accession | NP_716859 |
|---|
| Protein GI | 24372817 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2252] Permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGC AATTGAGTTC AACTGCCGTA CCCTCTGGTT CGTTTCTGAA CCGTTTTTTT
TCTATTCAAC AACGTGGTAG CACCGTTCGC CAAGAAGTGA TTGCAGGGTT AACAACCTTC
CTCGCGATGG TGTACTCAGT GATTGTGGTA CCCAATATGT TAGGCAAAGC GGGGTTCGAC
CCCGGTGCCG TGTTTGTTGC CACCTGCTTA ATTGCCGCCT TTGGCTCGCT GCTGATGGGA
CTCTGGGCGA ATCTGCCCAT GGCCATTGGT TGTGCGATTT CACTCACCGC CTTTACCGCC
TTCGGCTTGG TGTTAGGTCA GGGTATGAGT ATCCCTGTCA CCTTAGGCGC CATTTTTTGG
ATGGGGGTGA TTTTTACCAT CGTGAGTGTC ACTGGCATTC GTCAATGGGT GCTGGCTAAC
CTGCCTAAGG GGATCGCCCA TGGTACTGGG ATTGGTATTG GCTTGTTTTT ACTCTTGATT
GCCACTAACA GTGTGCAGTT GATTGTGGCC AATGATGCTG GCCTGCCAGT TAAGTTAGGT
GATATTAACA GCTTGCCGGT GATTGCCACT GTGGTGGGGC TTGCAGCGAC GATAGGTTTA
GAGCGTCGCG GTGTACCTGG CGGTATCTTG TTGGTGATTA TCGGCTTATC CCTTTTCGGC
TTAGTGTTTG ACCCCAGTGT GAAATATCAA GGTTTGTTTG CCCTGCCAAA TTTAACCTCT
GAGCATTCGC TAATTGGCCA ATTGGATATT ATGGGCGCCT TAAATCCTGT GGTATTACCG
ATTGTACTGG CATTGGTGAT GACGGCTATT TTTGATGCCA CTGGCACCAT CCGCGCGGTA
GCGGGTCAAG CCAATTTGCT GGATAAAGAC GATAATATCG TCGGTGGCGG TAAGGCATTA
ACGTCAGATT CTGTCAGTAG CATGTTTGCA GGTGTTGTTG GTGGCGCGCC AGCGGCCGTG
TATATCGAAT CTGCGGCGGG TACTGCGGCT GGCGGTAAGA CAGGCTTAAC GGCGACTATT
GTTGGAGTAT TATTCCTGTT AATGGTATTC CTTGCACCGC TCAGCTATTT GGTTCCTGCC
TACGCCACTG CACCAGCGCT GATGTATGTG GGACTATTGA TGCTTAGCAA TGTGACTAAG
CTAGATTTCA ACGACAAAGT CGATGCGATG GCGGGCCTAA CTTGCGCCGT GTTTATTATC
CTTAGCTGTA ACATTGTCAC AGGTATTATG CTTGGGTTTG TGACCTTAGT GATTGGCCGG
ATTTTTAGCG GCGAATGGCG TCAACTTAAG TTAGGCGTAT TAGCCATTAC CCTAGGCTTA
GTGGTGTTTT ACATGGGTGG CTGGGCAATT TAA
|
|---|
| Protein sequence | MSEQLSSTAV PSGSFLNRFF SIQQRGSTVR QEVIAGLTTF LAMVYSVIVV PNMLGKAGFD
PGAVFVATCL IAAFGSLLMG LWANLPMAIG CAISLTAFTA FGLVLGQGMS IPVTLGAIFW
MGVIFTIVSV TGIRQWVLAN LPKGIAHGTG IGIGLFLLLI ATNSVQLIVA NDAGLPVKLG
DINSLPVIAT VVGLAATIGL ERRGVPGGIL LVIIGLSLFG LVFDPSVKYQ GLFALPNLTS
EHSLIGQLDI MGALNPVVLP IVLALVMTAI FDATGTIRAV AGQANLLDKD DNIVGGGKAL
TSDSVSSMFA GVVGGAPAAV YIESAAGTAA GGKTGLTATI VGVLFLLMVF LAPLSYLVPA
YATAPALMYV GLLMLSNVTK LDFNDKVDAM AGLTCAVFII LSCNIVTGIM LGFVTLVIGR
IFSGEWRQLK LGVLAITLGL VVFYMGGWAI
|
|---|
| |