| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1230 |
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| Symbol | torS |
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| ID | 1169056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1278074 |
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| End bp | 1281151 |
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| Gene Length | 3078 bp |
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| Protein Length | 1025 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637343181 |
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| Product | sensor histidine kinase/response regulator TorS |
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| Protein accession | NP_716853 |
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| Protein GI | 24372811 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR02956] TMAO reductase sytem sensor TorS |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTCCTT TATCTTTATC GCGACGTAGT TTAACCGGCA GACTAATGCT CGCGTTTAGC
GTGCTTGGGC TTTTGCTATT GCTGTTGGTG AGTCTTGGTA GCTTGAGTTT ACATTGGCTT
AAACAAGCCG ATCGTTACCT GTATGAAGAA TCCTTACCCG CTTCTCAAGC TGCGCGGCAA
TTGGTGCAGG CCTCAAATGC GTTATCCGAT GGCGTGACTC AGTTAGGCCA GGTTGAGGAT
GAGCGGCAGC GGGAATTTAT CGGCCGTAAA TTGAACCTTG AAAGTGCCAC AATGTTAAAT
AGTATCAAAG TGTTGTTGGC ACTCGACGTG AATGAGGATA ATCATTTACC TGTTCTAGCA
GGGCAAATTA TTGAACAACT TACCTTGCTT GGTCAAAGTG TTGGCCAGCG TATCACCCTT
GGCGATGAGT TACAGCGCAG GGCCCGAGAA TTATCGGTTG CCGCGGCCCA TGCCTCTGAG
TTATTGCAAT CTGAGTTAGC GGTTGTCGAT TCGGCAATTT TAGCCAAACT GAGTCAAGCT
TATCCCGATA TGGCGGGGAA TAAACGCAGT GGGCAACTGC TTGATGATGT GATTGAACGT
GAGCTCGATA TCCAAGAACA GCTCAATCGC GCGCTCAAAT TAGTGCATCA AATTGCGCTG
CTCAGTCAGT TATTTGAGGT ATCGGAGTTG CAGTCTGAGC TGCAATTGAG TGTCCCGCGT
TTATTGGCAA CCTTTGCCAG CACATTACCC TCGCATCCTG TAGCGCACAT TAATCAGCAA
AAAGGGACTG CAATCGAGCA AGCATCGGAG GCTGTAACTG AGTTGTCGGC GCCAGAGGTT
GGTATCGATT TAATGGCGCT AACGACAGTT TCTGAGCTGA TACGCGATCC CGGTCGCCTC
AACGCCTTAA AGGCCGAGTT GGTTACCCTT AAACACACGC CAAAGATCAT TAAGTTACAG
CGAGACTTGA GCCAAAGTTT GCAGCGGCAA CAGCGCCAGC AGCAGGCATT AGCGGAAAAA
CTCTATAGTC TTAATACGTT GGTGGATAGT GCGCTCAATC AACAACAGCA GAGGGCAGAG
TTGGCGCGTA GTGATTATTT AATGCAGCTG TCCTACGCTC GGTTCGGCTT GTTGGCCACG
GGGATGTTGA TGTTTGTGAT CATGGGATGG GTCATTTATC GTGTGATTTA TCGTGGTATT
GCTTTGAGGT TGAATCAGGC AACGCAGGCC ATGTCGCGTT TAAGTTTGGG CGATATCAAT
GTGAGTCTTG ATGCCCGAGG TGATGATGAA TTAACTGCGA TGGCGAATGC AATTGAGGCA
TTTAAGCGAA AAACTGCCCA TAACCTTAAA TTACAGGCGG ATTTACGTCA GGTCGCCGAT
GAGTTGACCG AGCATAAAAA AGCCCTTGAA CAAACCGTAG CTACGCGGAC TCAGGAATTA
GCCGAGACAA ATCTTCGCCT CGATGCTGAG GCTAAAGGCC ATGCTAAGGC AAGGGTCGTT
GCCGAGGAGG CGAGTCAGGC CAAATCGCAA TTCCTTGCAA CGATGAGCCA TGAAATCCGC
ACCCCACTCA ATGGCTTATT GGGGACGTTA ACCTTGCTCG GCCAGAGTCA GTTACCGCCC
GCGCAGCAAC AGATGCTCGC CCTGTCGCAG TACAGCGGCA CATTATTGCA AACTGTGCTG
AGCGATATTC TTGATTTCTC CCGCCTTGAG CAGGGTAATT TAACCAATGA GCCAAGGCCA
ACGGATATCA ACGCCCTACT CGATGAAGTG CTGGCGATCA TGGTGGCGGG TGCCAATTTG
GCGGGATTGA GTTTAAGGCT GAACCGTCCT CAATTACCCG CTTGTATTAA TATCGATGGC
CCTAAGCTGC GGCAAGTGTT GTTTAACCTT ATCGGTAATG GCATTAAGTT TACCTCCGAA
GGCAGTGTCA GCCTGAATGT CAGCCTGCAG GGAGGTAGAT TAGCCTTTGT GGTGGCTGAT
ACTGGTGTGG GCATTGCCCC CGAGGTGCGT GAACAGTTAT TTATTCCCTA CAGTACATTG
CCAAATCAGG GGCGAAGCCG CGGGACAGGC TTAGGGCTGG CGATTTGTAA GCAGTTAGTT
GAGCTGATGG ATGCAAATGG TCGTGGTATT TGGGTCAAAA GTGAGCCTGG CAAGGGCAGT
GAGTTTGGTT TTGAACTCTG CTTTACGCAA TGCGATAAAG CCCAAGATGC CCAAACACTG
GTCCATAAGC AAGTGCATAC TCAGCGCGTG TTAGTGGTTG AGGATAACAA GGTCAATGCT
ATGGTCGCGC AGGGATTTTT GGCGCATTTA GGCCACAGTT CGACCTTGGC GGCAAGCTGC
CAACTCGCAC TGGAGTGTGT GAGTGCTGAT AAGGCATTCG ATGCCGTGAT GTTAGATATT
CAGTTGAGTG ATGGTTCTGG CGTGGCGTTA TTACCGCAGT TAAAGGCGTT ATTTGGGGCA
AAAAATGTTA AGTTTGCCGC TTTTACTGCG CAGATGCAGA TGGAGGATCT TAGCCTCTAT
CGTGAGGTGG GGTTTGATAC CGTGTTAGCC AAACCATTGA GTCTACAAAC GCTGACTCAA
TGGCTTGGGG TCGCTATGGC GTCATCTTCT TTGGAGACTG AAAGTCCTGG GTTGTCGGCG
AGTCCTTCTT TTATCTCGGC ATCTTCTGCG CCATTAGCTC AAGCAACGGA TACCAGTGGT
GCTATACCCC TTGGCAATCA AGCAACTGAA ACTCTACTGG ATATTGAACA GTTGCAACAA
GATATTGAGG TGCTGGGTGT GAAAGCGGTG AGTGATATGT TGGCGCTGTA TAAAACTTCT
AGCGCCGAGC AAATTGAGCG GCTATCAGAG GCAACTTTTG TGGAGAGTTC AGCCGACAGT
GCTAAATTAT TGCATGCACT TAAGGGCAGT AGTGCCAGCA TGGGACTAAA AGCACTGACT
CAGTGTTGTC AGGTATGGGA AAAGCAGCTT AAAACCACAG GCGCCCAAAA GCTTGAAATA
CAGTCGGCCA ATGAACTGAG AGCCTGCTGG CTAGCATCGA TGACGGCATT AGAACAGTGG
TTAGTCACCG TGGAATAG
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| Protein sequence | MAPLSLSRRS LTGRLMLAFS VLGLLLLLLV SLGSLSLHWL KQADRYLYEE SLPASQAARQ
LVQASNALSD GVTQLGQVED ERQREFIGRK LNLESATMLN SIKVLLALDV NEDNHLPVLA
GQIIEQLTLL GQSVGQRITL GDELQRRARE LSVAAAHASE LLQSELAVVD SAILAKLSQA
YPDMAGNKRS GQLLDDVIER ELDIQEQLNR ALKLVHQIAL LSQLFEVSEL QSELQLSVPR
LLATFASTLP SHPVAHINQQ KGTAIEQASE AVTELSAPEV GIDLMALTTV SELIRDPGRL
NALKAELVTL KHTPKIIKLQ RDLSQSLQRQ QRQQQALAEK LYSLNTLVDS ALNQQQQRAE
LARSDYLMQL SYARFGLLAT GMLMFVIMGW VIYRVIYRGI ALRLNQATQA MSRLSLGDIN
VSLDARGDDE LTAMANAIEA FKRKTAHNLK LQADLRQVAD ELTEHKKALE QTVATRTQEL
AETNLRLDAE AKGHAKARVV AEEASQAKSQ FLATMSHEIR TPLNGLLGTL TLLGQSQLPP
AQQQMLALSQ YSGTLLQTVL SDILDFSRLE QGNLTNEPRP TDINALLDEV LAIMVAGANL
AGLSLRLNRP QLPACINIDG PKLRQVLFNL IGNGIKFTSE GSVSLNVSLQ GGRLAFVVAD
TGVGIAPEVR EQLFIPYSTL PNQGRSRGTG LGLAICKQLV ELMDANGRGI WVKSEPGKGS
EFGFELCFTQ CDKAQDAQTL VHKQVHTQRV LVVEDNKVNA MVAQGFLAHL GHSSTLAASC
QLALECVSAD KAFDAVMLDI QLSDGSGVAL LPQLKALFGA KNVKFAAFTA QMQMEDLSLY
REVGFDTVLA KPLSLQTLTQ WLGVAMASSS LETESPGLSA SPSFISASSA PLAQATDTSG
AIPLGNQATE TLLDIEQLQQ DIEVLGVKAV SDMLALYKTS SAEQIERLSE ATFVESSADS
AKLLHALKGS SASMGLKALT QCCQVWEKQL KTTGAQKLEI QSANELRACW LASMTALEQW
LVTVE
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