Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1226 |
Symbol | radA |
ID | 1169052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1274209 |
End bp | 1275573 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637343177 |
Product | DNA repair protein RadA |
Protein accession | NP_716849 |
Protein GI | 24372807 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGA ATAAAACCGC GTACGTGTGC AATGAGTGTG GGCAGGATTT TCCCCGTTGG CAAGGGCAAT GCAGTGCTTG TCACGAGTGG AATACGATAA CTGAAGTACG CTTAGGCGCC GCCTCGCCCG GACGGGGGAC TAAATTTGCC GGTTATGCCG GTGCTGGCAG TAGCGAAGTC AAAACCTTAG ATCAAATAGA TCTTAATGCT TTACCCCGTA TTGTTAGCCA TTTTGGTGAA CTCGATCGTG TACTCGGTGG GGGAATTGTT CCTGGCTCGG CGATTCTGAT TGGCGGTCAT CCGGGAGCGG GCAAGAGTAC TTTGCTGCTT CAAACCCTAT GCCATTTAGC GGAGCAAATG CCTGCGTTGT ATGTGACGGG GGAGGAATCC TTACAGCAGG TTGCCATGCG AGCCCATCGC CTTGGTTTGC CGACCAATAA ACTGCGGATG TTATCCGAGA CGAGTGTTGA GCAGATTTGC GAAATCGCCC TGCAAGAATC CCCGAAAGTG ATTGTTGTCG ACTCTATTCA AGTCATGCAC ATGAGCGATG TGGCATCGAG CCCTGGCAGT GTATCGCAGG TGCGTGAATC GGCTTCCTAT TTAACTCGTT TTGCAAAACA GCACGGCATT GCTGTGATTA TGGTGGGCCA TGTGACTAAG GATGGTAGCC TCGCGGGTCC TAAAGTGCTG GAACACTGTA TCGATTGCTC AGTCATGTTT GAAGGGGATA GCGACAGTCG TTATCGTACT TTACGCTCCC ATAAAAACCG GTTTGGGGCG ATCAATGAAC TTGGGGTGTT TGCCATGACA GAGCGCGGCC TAAAGGAGGT TGCTAATCCT TCGGCAATTT TCCTCTCCCG TGGTGAGGAG GAATCCTCGG GATCCTTGGT CATGGTGGTG TGGGAAGGTA CGCGTCCGCT ACTGGTTGAA TTGCAAGTGC TGGTGGATAA TTCGGCCATG TCGAATCCGC GCCGCGTGGC GGTGGGGATG GATGCAAACC GTCTAGCCAT GTTACTTGCG GTCATGCATC GCCATGGTGG CTTGCAAATG TCGGATCAGG ACGTGTTTGT GAACGTGGTA GGCGGGGTTA AAGTGACCGA AACCAGTGCC GACTTAACCC TGCTACTGGC CATGGTATCG AGTTTTCGTG GCGATATTTT ACCGAGCGAT TTGGTTGTGT TCGGTGAGGT AGGGTTATCT GGTGAAATTC GCCCAGTGCC AAATGGCCAA GAGCGTTTAG TCGAAGCCGC TAAACATGGT TTTAAACGAG CGATAGTGCC TCGAGCTAAC GTGCCGAAAA AACCGCCTGT GGGAATGGAA GTGGTGGGCG TTTCCAAACT ATCAGAAGCC CTTGAAGCAA TCTAA
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Protein sequence | MAKNKTAYVC NECGQDFPRW QGQCSACHEW NTITEVRLGA ASPGRGTKFA GYAGAGSSEV KTLDQIDLNA LPRIVSHFGE LDRVLGGGIV PGSAILIGGH PGAGKSTLLL QTLCHLAEQM PALYVTGEES LQQVAMRAHR LGLPTNKLRM LSETSVEQIC EIALQESPKV IVVDSIQVMH MSDVASSPGS VSQVRESASY LTRFAKQHGI AVIMVGHVTK DGSLAGPKVL EHCIDCSVMF EGDSDSRYRT LRSHKNRFGA INELGVFAMT ERGLKEVANP SAIFLSRGEE ESSGSLVMVV WEGTRPLLVE LQVLVDNSAM SNPRRVAVGM DANRLAMLLA VMHRHGGLQM SDQDVFVNVV GGVKVTETSA DLTLLLAMVS SFRGDILPSD LVVFGEVGLS GEIRPVPNGQ ERLVEAAKHG FKRAIVPRAN VPKKPPVGME VVGVSKLSEA LEAI
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