| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1221 |
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| Symbol | deoD |
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| ID | 1169047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1267398 |
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| End bp | 1268108 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637343172 |
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| Product | purine nucleoside phosphorylase |
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| Protein accession | NP_716844 |
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| Protein GI | 24372802 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0813] Purine-nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACAC CACACATTAA TGCTGTAGAG GGCGCATTCG CTGAGACAGT TTTGTTTCCT
GGCGATCCAT TACGTGCAAA ATATATTGCT GAAACATTCT TAGAAAATGT TGAGCAAGTG
ACTGATGTTC GCAACATGCT AGGTTTTACC GGTACTTACA AGGGTAAACG TATTTCTGTG
ATGGGTTCTG GCATGGGTAT TCCTTCATGC TCAATCTATG CAACTGAATT AATTAAAGAT
TATGGCGTTA AAAACCTGAT CCGTGTTGGC ACTTGTGGCG CAATAAGCAC AGACGTTAAA
GTGCGCGATG TGATCATCGG TATGGGGGCA TGTACTGATT CGCAAGTAAA CCGTTTACGT
TTTAAAGGCC AAGATTTCGC GGCTATCGCG AACTATGAGC TGATGAATGC TGTGATTGAA
TCTGCCAAAG TCAAAGGCAC TAAGATCCGT GTGGGTAACG TATTCTCTGC TGATCTGTTC
TACACGCCAG ATCCACAAAT GTTTGACGTA ATGGAAAAAA TGGGTGTGCT AGGGGTAGAA
ATGGAAGCCG CTGGTTTATA CGGTGTTGCC CATGAGTTCG GTGCTCGCGC ACTGTGTGTG
GTAACGGTAT CTGACCATAT CCGTACTGGC GAAAAGACGA CTTCAGAAGA GCGTCAAACC
ACGTTCAACG ATATGATCGT GATGACTTTA GACGCTGCGA TTACGCTGTA A
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| Protein sequence | MATPHINAVE GAFAETVLFP GDPLRAKYIA ETFLENVEQV TDVRNMLGFT GTYKGKRISV
MGSGMGIPSC SIYATELIKD YGVKNLIRVG TCGAISTDVK VRDVIIGMGA CTDSQVNRLR
FKGQDFAAIA NYELMNAVIE SAKVKGTKIR VGNVFSADLF YTPDPQMFDV MEKMGVLGVE
MEAAGLYGVA HEFGARALCV VTVSDHIRTG EKTTSEERQT TFNDMIVMTL DAAITL
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