| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1217 |
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| Symbol | deoC |
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| ID | 1169044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1263796 |
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| End bp | 1264566 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637343169 |
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| Product | deoxyribose-phosphate aldolase |
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| Protein accession | NP_716840 |
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| Protein GI | 24372798 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
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| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATT TAAAAAAAGC AGCACAACGC GCCATCGAAC TTATGGATTT AACTACCCTA
AATGATGACG ATACCGATCA GAAAGTGATC GATTTGTGTC ACAAAGCTGT GACGCCTGCA
GGCAACACCG CTGCTATCTG TATTTATCCT CGATTTATTC CTATCGCACG TAAAACTCTT
GATGAACTGG GTGCTGAAGA TATTCAAATC GCCACTGTTA CTAACTTCCC ACACGGTAAT
GATGATATTG CTATCGCCGT ATTAGAAACC CGTGCAGCCG TTGCCTATGG TGCCGATGAA
GTGGACGTGG TATTCCCATA CCGCGCGCTG ATGGAAGGCA ACGAAACTGT CGGATATGAG
TTAGTCAAAG CCTGTAAGGA AGCCTGTGGT GAAGTATTAC TGAAAGTGAT CATCGAATCT
GGCGTATTAG CCGATCCAGT GCTTATTCGC CGCGCCTCTG AGCTTTCTAT CGAAGCAGGT
GCCGACTTTA TTAAGACTTC AACAGGTAAA GTGCCTGTGA ATGCGACCTT GGAAGCGGCT
GAAATCATGC TCACAGTGAT CAGTGAAAAG AACACCAAAG TCGGCTTTAA GCCTGCCGGT
GGTGTACGTG ATGCCGCTCA AGCGGCTGAG TTTTTAGGTG TGGCTGAGCG TATTCTGGGG
GCTGATTGGG TGTCTCCACG CACCTTTAGA TTTGGTGCTT CAAGCTTGCT CAACAGCTTG
CTACACACGC TAGAATTAGC CGATGCGCCT AAGCGGACTC AAGGCTATTA A
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| Protein sequence | MTDLKKAAQR AIELMDLTTL NDDDTDQKVI DLCHKAVTPA GNTAAICIYP RFIPIARKTL
DELGAEDIQI ATVTNFPHGN DDIAIAVLET RAAVAYGADE VDVVFPYRAL MEGNETVGYE
LVKACKEACG EVLLKVIIES GVLADPVLIR RASELSIEAG ADFIKTSTGK VPVNATLEAA
EIMLTVISEK NTKVGFKPAG GVRDAAQAAE FLGVAERILG ADWVSPRTFR FGASSLLNSL
LHTLELADAP KRTQGY
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