| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1213 |
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| Symbol | |
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| ID | 1169041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1259952 |
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| End bp | 1260722 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637343166 |
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| Product | TatD family hydrolase |
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| Protein accession | NP_716836 |
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| Protein GI | 24372794 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGATGATGC TAGATACCCA TGCGCATTTG GATTTTTCTG AATTTGACGC TGACCGCGAC
GACGTAGTGC AACGTATGCG GCAAGTGGGC ATTGATAATC TCATTATTCC CGGGGTTTCA
CCCGAACATT GGCCTAAACA GTTGGCGATT GCCAAGCAGT ATCAAAGTTA TTTTGCCTTA
GGTATTCATC CTTGGTTTTG TCCAGAAAAT GTGGATGAAA CGATTTCTGC ATTAACATTG
CTCGTTTCTC AGTTACGAGA ATGTCCCCGT TTTGTTGCAA TTGGTGAATG CGGTTTAGAT
AAACTTTATC CTGACAATTG GAATCTACAG CTACTTTTTT TTGAAGCGCA ACTGGCGTTG
GCCCATGACG TCAATCTGCC GATTATTATC CATGCTGTAA AAGCGCATCA AGAAGTTTTG
TCCTATTTAA AGCGCCATAA ACTGCCCCGA GGTGGCGTTA TTCATGCCTT CTCTGGCAGT
AGTGATATCG CTCTCGAATA TACTAAGCTT GGTTTTAAGC TTGGGATTGG TGGTTTAATT
ATGAATCCCA ATGCGAAAAA ACTGCTCAAA ACTGTTAGTG AGTTGCCCTT AGACAGTTTC
CTACTTGAGA CTGATTCTCC TGCCATGACT CCGCTCAATG TTACAGATAA ACGCAACCAG
CCCGCTAATG CTGTACTTTT TATGGACAAA ATTGCAACTT TGCAAAAAAA ATCTAGTGTT
CTAATATCAG AACACTTGGT GTTGAATGCA ATGCAACTGT TTGACCTTTA G
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| Protein sequence | MMMLDTHAHL DFSEFDADRD DVVQRMRQVG IDNLIIPGVS PEHWPKQLAI AKQYQSYFAL
GIHPWFCPEN VDETISALTL LVSQLRECPR FVAIGECGLD KLYPDNWNLQ LLFFEAQLAL
AHDVNLPIII HAVKAHQEVL SYLKRHKLPR GGVIHAFSGS SDIALEYTKL GFKLGIGGLI
MNPNAKKLLK TVSELPLDSF LLETDSPAMT PLNVTDKRNQ PANAVLFMDK IATLQKKSSV
LISEHLVLNA MQLFDL
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