| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1203 |
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| Symbol | nusA |
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| ID | 1169031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1246441 |
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| End bp | 1247940 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637343158 |
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| Product | transcription elongation factor NusA |
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| Protein accession | NP_716828 |
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| Protein GI | 24372786 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAG AGATTCTGCT AGTCGCTGAA GCGGTTTCAA ATGAAAAGGC CGTTCCACGC
GAGAAAATTT TTGAAGCGCT AGAGACTGCG CTGGCTACCG CTACCAAGAA AAAATACGAA
GGTGATATCG ACGTTCGTGT TGCTATCGAC CGTAAAACTG GCGCTTATGA AACTTTCCGC
CGTTGGATGG TGATCGATGA CAACGGTGTT GCGTTAGAAA ACCCATACCG TGAGATCACA
CTGGAAGCGG CACGTTTCGA AGAACCAGAG ATCCAACCTG GCGAATACAT TGAAGACCAA
ATTGAATCAG TGGCTTTTGA CCGTATTACC ACTCAAACCG CCAAGCAAGT CATCGTGCAG
AAGGTGCGTG AAGCTGAGCG GGCGCAAGTG GTTGAGCAGT TCCAAGATAA AGAAGGCGAA
CTGATCACTG GTGTTGTTAA GAAAGCAACC CGTGAAAGTG TCGTTGTCGA CTTAGGCAAT
AACGCTGACG GCGTATTGTT CCGTGAAGAC TTGATTTCAC GCGAATCTTT CCGTCCTGGT
GACCGTGTTC GTGCACTGCT TTACTCAGTT CGTCCTGAAG CGCGTGGCGC GCAGTTATTT
TTAACTCGCA CTAAGCCAGA CATGCTTATT GAGCTGTTCC GCGTTGAAGT ACCGGAAATT
GCCGATGAAT TGATTGAAGT GATGGGCGCA GCGCGCGACC CTGGTGCGCG AGCTAAGATC
GCCGTGAAAT CAAACGACCG TCGTATCGAC CCCATCGGTG CTTGCGTTGG TATGCGTGGT
GCGCGTGTTC AAGCCGTATC GAATGAACTC GGTGGTGAGC GTGTTGATAT CGTGCTGTGG
GATGATAATC CAGCACAATA TGTGATCAAC GCCATGGCGC CAGCTGATGT GGCTTCTATC
ATCGTAGATG AAGACAACCA CTCAATGGAT ATCGCCGTTG AAGCAGAAAG TTTGGCTCAG
GCCATTGGTC GCAATGGGCA AAACGTTCGT TTAGCAACTC AGCTGACTGG CTGGGAACTG
AACGTGATGA CAGTGGAAGA CATGAATAAG AAACACCAAG CCGAAAGCGC TAAGGTGAAG
AGCTTATTTA TGAAATCTCT GGATGTAGAT GAAGATTTTG CACAAGTACT GGCTGATGAA
GGTTTTACTT CGCTCGAAGA AGTGGCTTAT GTGCCTGTGT CTGAATTATT AGCAATTGAT
GGTTTCGATG AGGATCTCGT TGAAGCATTA CGTGAACGTG CAAAGGCTGC GATCTCAACT
CGAGCGCTCG CATCTGAAGA AGCACTAGAT GGTGTGGAGC CAAGTGAAGA GTTATTAGCA
CTTGAAGGTG TTGAAAGACA CTTAGCCTAT GTTTTAGCAA GCAAAGGTAT CGTAACTCTA
GAAGATTTGG CTGAACAAGG CATTGATGAT TTGATCGAAA TTGAAGAATT GACAGAAGAA
AAAGCAGGTG AGCTGATCAT GGCCGCCCGC AACATCTGTT GGTTTGGCGA AGAAGCATAA
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| Protein sequence | MNKEILLVAE AVSNEKAVPR EKIFEALETA LATATKKKYE GDIDVRVAID RKTGAYETFR
RWMVIDDNGV ALENPYREIT LEAARFEEPE IQPGEYIEDQ IESVAFDRIT TQTAKQVIVQ
KVREAERAQV VEQFQDKEGE LITGVVKKAT RESVVVDLGN NADGVLFRED LISRESFRPG
DRVRALLYSV RPEARGAQLF LTRTKPDMLI ELFRVEVPEI ADELIEVMGA ARDPGARAKI
AVKSNDRRID PIGACVGMRG ARVQAVSNEL GGERVDIVLW DDNPAQYVIN AMAPADVASI
IVDEDNHSMD IAVEAESLAQ AIGRNGQNVR LATQLTGWEL NVMTVEDMNK KHQAESAKVK
SLFMKSLDVD EDFAQVLADE GFTSLEEVAY VPVSELLAID GFDEDLVEAL RERAKAAIST
RALASEEALD GVEPSEELLA LEGVERHLAY VLASKGIVTL EDLAEQGIDD LIEIEELTEE
KAGELIMAAR NICWFGEEA
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