| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1200 |
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| Symbol | tpiA |
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| ID | 1169028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1244412 |
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| End bp | 1245194 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637343153 |
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| Product | triosephosphate isomerase |
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| Protein accession | NP_716825 |
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| Protein GI | 24372783 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACTCA GACGTCCTAT GGTAGCTGGC AATTGGAAGA TGAACGGCAG TGCGGCATTA
GCCCAAGAGT TGTTCAAGAA ATTTGCCTCA AAGCTCCAAA ATGATTCAGC TGAAGTGGTT
TTATGCCCGC CTTCTATCTA TCTAGAAAGC GTCAGGCAAC TGCTAGAAGC AAACAAGGAA
GCGTTAGACG GTTCACTTGT TAGGATGGGC GCACAGAATT TAAGTCAGCA TGACTTTGGC
GCTTATACCG GAGAAGTTTC GGGTCAGATG CTTAAAGATT GCGGATGTCG ATATGTTATT
ATCGGGCATT CAGAACGTCG CCGTATGTAC GGAGAGACGA GTAATATTGT AGCGGAGAAA
TTCGCTGCAG CACAAAAGCA CGGCTTAACC CCTATTTTAT GTGTGGGAGA GTCGGGTCCA
GCACGAGAAG CAAGACGTAC TTTTGAGGTG ATTGCTGAAG AGTTGGACAT AGTGATCCAA
AAAAATGGCA CTATGGCTTT TGATAACGCC ATTATCGCTT ACGAGCCATT ATGGGCAGTA
GGAACTGGTA AGAGCGCTAC ACCAGAGCAG GCGCAAGAAG TTCATGCGTT TATTCGCAAA
CGTCTCTCTG AAGTGTCTCC ATTTATTGGG GAAAATATCA GGATTCTCTA CGGTGGAAGT
GTGACACCGA GTAACGCGGC AGATTTATTT GCCCAACCTG ATGTTGATGG TGGACTGATT
GGCGGTGCCA GTTTAAACTC TACCGAGTTT TTAAGTCTGT GTACCATAGC GATGAGCGCA
TAA
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| Protein sequence | MALRRPMVAG NWKMNGSAAL AQELFKKFAS KLQNDSAEVV LCPPSIYLES VRQLLEANKE
ALDGSLVRMG AQNLSQHDFG AYTGEVSGQM LKDCGCRYVI IGHSERRRMY GETSNIVAEK
FAAAQKHGLT PILCVGESGP AREARRTFEV IAEELDIVIQ KNGTMAFDNA IIAYEPLWAV
GTGKSATPEQ AQEVHAFIRK RLSEVSPFIG ENIRILYGGS VTPSNAADLF AQPDVDGGLI
GGASLNSTEF LSLCTIAMSA
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