Gene SO_1188 details

Gene Information

• Locus tag: SO_1188
• ID: 1169016
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 1232240
• End bp: 1232773
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637343141
• Product: hypothetical protein
• Protein accession: NP_716813
• Protein GI: 24372771
• COG category: [S] Function unknown
• COG ID: [COG3295] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGTTGC TTTTATTAAT GCTATTTTTT GCGATTACGG GGATCACTTT AAATCATCCC 
AATTGGTTTT CATCGGCGGA TCAAGAGCCG CTGCGTGAGC AGTTTGATAT TCCAAGCTAT 
TTGATTCCGA CTGCGCCGCA GGAGTCCGAG TGGCGCTTGG CGGCAGGACA TTGGCTTAAA 
AGTCAGTGGG ATATGGATAT TGCCACAGCC GATATTAATG AGGATGAAAT CAGTCTGGTG 
AGTAAGGGGC CTGGCACCTA TCGCACCGTC ACCTTAGATT TGCTCGACGG CAAAGCCTAT 
GTCGAGACCT TAGATTATGG TGTTGTCGCA GTGCTTAATG ATCTGCACAA GGGCCGTAAT 
ACTGGAATAG TGTGGGCTTG GGTGCTCGAT CTCTGTGCGC TGTTGATTAT TTTGTTCTCG 
CTCACGGGCG CATATTTACT GTTACCACAA ACCAAAAGAC TTAAAAAATC GTTGTTTTAT 
ATGGTGCTCG TTAGCTCTGG CTGCGCACTT GTATATGTTT ATTTTGTTCC ATAG 

 

Protein sequence

MALLLLMLFF AITGITLNHP NWFSSADQEP LREQFDIPSY LIPTAPQESE WRLAAGHWLK 
SQWDMDIATA DINEDEISLV SKGPGTYRTV TLDLLDGKAY VETLDYGVVA VLNDLHKGRN 
TGIVWAWVLD LCALLIILFS LTGAYLLLPQ TKRLKKSLFY MVLVSSGCAL VYVYFVP