Gene SO_1184 details

Gene Information

• Locus tag: SO_1184
• Symbol: pth
• ID: 1169013
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 1227499
• End bp: 1228086
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637343131
• Product: peptidyl-tRNA hydrolase
• Protein accession: NP_716809
• Protein GI: 24372767
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0193] Peptidyl-tRNA hydrolase
• TIGRFAM ID: [TIGR00447] peptidyl-tRNA hydrolase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAAA TTAAATTAAT CGTAGGTCTT GCCAACCCTG GCGCCGAATA TGTGCAGACT 
CGCCATAATG CGGGCGCTTG GTATGTGGAA GAATTGGCCC GTATCTGTGG TGTGAGCTTA 
GTCGCCGATA GCAAGTATTT TGGCCTGACA GCCAGAGCTG TGTTGCACGG TAAAGATGTG 
CGTTTGCTGA TCCCAACTAC CTACATGAAC TTAAGCGGTA AAGCCGTAGG CGCTTTAGCT 
AATTTCTTTC GTATTACACC CGAAGAAATT CTGGTGGCCC ACGATGAACT GGATATGCCG 
CCGGGCGTGG CTAAATTTAA GTTAGGTGGT GGCCATGGTG GTCATAATGG CTTAAAAGAC 
ATTATTGCCA AATTAGCCAA TGATAAAAAC TTTTACCGTT TACGGATTGG GATTGGTCAT 
CCTGGCGATA AGAATAAAGT CAGTGGTTAC GTACTGGGTA AGGCCCCGGC GAAAGAGCAA 
GAGCTGATCA ATGCCGCCGT GGACGAAGCC GTGCGCTCAA CTGAAATTTT ATTTAAAGAG 
GACATGGTGA AAGCCATGAC TCGATTACAC TCCTTTAAAG CGGAGTAA 

 

Protein sequence

MSEIKLIVGL ANPGAEYVQT RHNAGAWYVE ELARICGVSL VADSKYFGLT ARAVLHGKDV 
RLLIPTTYMN LSGKAVGALA NFFRITPEEI LVAHDELDMP PGVAKFKLGG GHGGHNGLKD 
IIAKLANDKN FYRLRIGIGH PGDKNKVSGY VLGKAPAKEQ ELINAAVDEA VRSTEILFKE 
DMVKAMTRLH SFKAE