Gene SO_1167 details

Gene Information

• Locus tag: SO_1167
• Symbol: rodA
• ID: 1168996
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 1209603
• End bp: 1210721
• Gene Length: 1119 bp
• Protein Length: 372 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637343114
• Product: rod shape-determining protein RodA
• Protein accession: NP_716792
• Protein GI: 24372750
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0772] Bacterial cell division membrane protein
• TIGRFAM ID: [TIGR02210] rod shape-determining protein RodA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGAAACCA ACGCCATGAG TGCCCATCAA CGTCAAAATA TCTGGCAACG ATTACATATC 
GACTTGCCCT TACTACTCGG CCTCCTTGCC GTCATGGGCT TTGGCCTCTT CGTCATCTAT 
TCCGCCAGTG GTGAAGACCT TGGCATGATG GAAAGACAAC TGTTTAGGAT GTTTTTATCC 
ATATGCGTCA TGTTTACGAT GGCACAAATC AATCCTGAAG CACTAAAACG TTGGGCACTG 
CCGATTTACC TTGCAGGGGT AGTCCTTCTG CTGGCGGTAC ACTTTTTTGG GGAAATCAAT 
AAAGGTGCGC AGCGCTGGTT AAACTTAGGT TTTATGGAGT TTCAGCCATC AGAGCTAATT 
AAACTCGCCT TCCCCATCAC TATGGCTTGG TATATCAGTA AGTTCCCTTT GCCCCCTAAA 
AAACGTTATT TGGCGGGCGC GGGCGTTATT CTGCTGATAC CCACACTGTT AATTGCTAAA 
CAACCCGATC TCGGCACCTC AATTTTGGTT GCGGCATCGG GTATTTTCGT GCTGTTTTTA 
TCAGGGATGA GCTGGGCGAT TGTCGGCGGC TTTATTGCCG CCGTATTGGC GTTTTTGCCC 
ATTCTCTGGT ACTTCTTGAT GCACGATTAC CAAAGGACTC GAGTGTTAAC CCTGCTCGAT 
CCAGAGCAAG ATCCCCTCGG TGCGGGTTAT CATATTATCC AGTCAAAAAT CGCCATCGGC 
TCAGGCGGTC TTTGGGGTAA AGGATGGCTC GATGGCACCC AATCCCAGTT AGAATTTATC 
CCCGAGCGTC ATACTGACTT TATCTTTGCG GTGATCGGCG AAGAGTTTGG CCTGATTGGC 
AGCATTATCC TGCTCCTAAT GTATCTTTAC ATCATTGGAC GTGGCTTAGT GATTGCCTCC 
AACGCCCAAA CGAGCTTTGC ACGATTACTT GCAGGCAGTA TCACATTGAC TTTCTTCGTT 
TATGTTTTTG TGAACATTGG CATGGTTTCA GGTATTCTGC CTGTGGTAGG CGTGCCTTTG 
CCCCTTGTCA GCTATGGCGG CACCTCAATG CTGACATTGA TGACAGGATT TGGCATTCTG 
ATGAGCATTC ATACCCATAG ACGTTTTGTA GATAGATAA 

 

Protein sequence

METNAMSAHQ RQNIWQRLHI DLPLLLGLLA VMGFGLFVIY SASGEDLGMM ERQLFRMFLS 
ICVMFTMAQI NPEALKRWAL PIYLAGVVLL LAVHFFGEIN KGAQRWLNLG FMEFQPSELI 
KLAFPITMAW YISKFPLPPK KRYLAGAGVI LLIPTLLIAK QPDLGTSILV AASGIFVLFL 
SGMSWAIVGG FIAAVLAFLP ILWYFLMHDY QRTRVLTLLD PEQDPLGAGY HIIQSKIAIG 
SGGLWGKGWL DGTQSQLEFI PERHTDFIFA VIGEEFGLIG SIILLLMYLY IIGRGLVIAS 
NAQTSFARLL AGSITLTFFV YVFVNIGMVS GILPVVGVPL PLVSYGGTSM LTLMTGFGIL 
MSIHTHRRFV DR