| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1164 |
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| Symbol | dacA-1 |
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| ID | 1168993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1206370 |
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| End bp | 1207542 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637343111 |
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| Product | D-alanyl-D-alanine carboxypeptidase |
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| Protein accession | NP_716789 |
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| Protein GI | 24372747 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTG TAAAAAGTCC CATTAAGACA TTGCTGCTAA TTTCGAGTGT TTCTCTTCCT
GTTTATGCTG CGCAGCCGAT TGTTACCCCT GATGCACCAA CCGTTGCCGC CAAGGCTTAC
GTCTTGATGG ATTATTATTC AGGCCAAATC ATTGCCGAAG AAAATGCCTA CGAAAGCTTA
AACCCTGCCA GCTTAACCAA AATGATGACC AGTTATGTCA TTGGTCAGGA AATTAAAGCA
GGTAACGTTT CCCCCGATGA TGATGTCACC ATCAGTAAAA ATGCTTGGTC AAAAAACTTC
TCTGACTCAT CAAAAATGTT CATCGAAGTG GGTAAAACCG TAAAAGTATC CGATTTAAAC
CGCGGGATCA TCATCCAATC AGGTAACGAT GCCTGTGTGG CGATGGCGGA ACATATCGCA
GGCACCGAAG GCGCTTTCGT CGACATGATG AACTCATGGT CAAAACAGCT AGGAATGCGT
GATAGCTATT TTGAAAACTC CCACGGACTT GATTCAGAAA ACCACAAAAC GACCGCCTAT
GATATGGCGC TTTTAGGCGC GGCACTGATC CGCGACGTAC CTGAAGAATA TCGCATCTAC
AGCGAAAAAT ACTATACCTT CAATGGCATC AAGCAATATA ACCGCAACGG CCTGTTGTGG
GATAACAGCA TGAATGTGGA TGGTATCAAA ACCGGTCACA CCTCTGGCGC GGGTTATAAC
TTAGTCGCGT CAGCCACAAA AGACGGTATG CGTTTAATTT CGGTTGTTAT GGGTACTCAA
AGTGAAGCCG CCCGTAAAGC AGAAAGTAAA AAACTGCTCA CCTATGGTTT CCGCTTCTTC
GAAACTGTTA CTCCATACAA GGCTGGTGAC AGCTTCGTTA CCCAACAAAT TTGGTACGGC
GATAAAAGCA CTGTGGATTT AGGTGTCGCG ACCGATACAC CAATCACCGT CAGCCGTGGC
CGCGCAAAAG ACTTGAAAGC AAACTTCGAG CTGACTAAGC CACTCGATGC GCCACTGAAA
AAAGGCGAAA CCGTGGGCCG CTTATACTTC CAGTTAGATG GTAAAGATAT TGCACAATTC
CCACTGGTCA CCTTACAAGA AGTCAACGAA GGCAGCTGGT TCAGTAAATT AGTCGATTAC
TTTAAGCAAC TGTTTTCTGG TTGGTTTAGC TAA
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| Protein sequence | MNFVKSPIKT LLLISSVSLP VYAAQPIVTP DAPTVAAKAY VLMDYYSGQI IAEENAYESL
NPASLTKMMT SYVIGQEIKA GNVSPDDDVT ISKNAWSKNF SDSSKMFIEV GKTVKVSDLN
RGIIIQSGND ACVAMAEHIA GTEGAFVDMM NSWSKQLGMR DSYFENSHGL DSENHKTTAY
DMALLGAALI RDVPEEYRIY SEKYYTFNGI KQYNRNGLLW DNSMNVDGIK TGHTSGAGYN
LVASATKDGM RLISVVMGTQ SEAARKAESK KLLTYGFRFF ETVTPYKAGD SFVTQQIWYG
DKSTVDLGVA TDTPITVSRG RAKDLKANFE LTKPLDAPLK KGETVGRLYF QLDGKDIAQF
PLVTLQEVNE GSWFSKLVDY FKQLFSGWFS
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