| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1161 |
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| Symbol | lipA |
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| ID | 1168990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1204274 |
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| End bp | 1205239 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637343108 |
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| Product | lipoyl synthase |
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| Protein accession | NP_716786 |
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| Protein GI | 24372744 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0320] Lipoate synthase |
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| TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAGGC CTGAACGTTT ACAACCCGGA GTCAAATTAA GAGATGCCGA AAAGGTCTCA
CGTATTCCGG TTAAAATCGT GCCCTCTGAG CGCGAAACCA TGTTACGCAA ACCAGATTGG
TTAAGGGTTA AACTGCCCGC ATCTAACCAA CGCATTCTCG ACATTAAGCA AGCGTTACGC
GCTAACGGCC TGCACTCGGT CTGTGAAGAG GCCTCCTGCC CGAACTTGGC AGAATGTTTT
AACCACGGCA CAGCAACCTT TATGATTTTG GGTGCAATTT GTACTCGCCG TTGCCCCTTC
TGTGACGTGG CCCATGGTCG TCCTCTCAAG CCTGATGAGC AGGAACCCGT TAAGCTGGCA
CAAACCATCC GCGATATGAA GCTGAAATAC GTGGTCATCA CCTCGGTTGA CCGCGACGAC
CTGCGTGATG GCGGAGCCCA GCACTTTGCC GACTGTATCC GCGAGATCCG CAAACTCAAT
CCAGAAATTA AGATTGAGAT CTTAGTCCCC GATTTCCGTG GCCGTATCGA CGCCGCCCTC
GACATACTGT CGACCGAGCC GCCTGATGTG TTCAACCACA ACCTCGAAAC CGCACCTATG
CACTATCGCA AGGCGCGTCC AGGGGCGAAC TATCAATGGT CCCTCGACCT ACTAAAACGC
TTTAAAGAGC GTCACCCAAA TGTACCGACT AAGTCGGGAC TGATGATGGG TCTAGGCGAA
ACCAACGATG AAATCGCCCA AGTGCTACGC GACTTACGTG AGCACAAGGT CGAAATGCTG
ACCTTAGGCC AATACCTGCA ACCATCTAAG TTCCATCTGC CGGTTGAGCG TTACGTATCA
CCCGCAGAGT TTGATGAGCT AAAAGCCCTT GCCGATGAGC TGGGTTTTAC TCACGCAGCC
TGTGGTCCAT TAGTGCGTTC AAGCTACCAT GCTGACTTAC AAGCCCAAGG TAAAGAAGTG
AAGTAA
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| Protein sequence | MNRPERLQPG VKLRDAEKVS RIPVKIVPSE RETMLRKPDW LRVKLPASNQ RILDIKQALR
ANGLHSVCEE ASCPNLAECF NHGTATFMIL GAICTRRCPF CDVAHGRPLK PDEQEPVKLA
QTIRDMKLKY VVITSVDRDD LRDGGAQHFA DCIREIRKLN PEIKIEILVP DFRGRIDAAL
DILSTEPPDV FNHNLETAPM HYRKARPGAN YQWSLDLLKR FKERHPNVPT KSGLMMGLGE
TNDEIAQVLR DLREHKVEML TLGQYLQPSK FHLPVERYVS PAEFDELKAL ADELGFTHAA
CGPLVRSSYH ADLQAQGKEV K
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