| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1140 |
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| Symbol | dapB |
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| ID | 1168970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1180778 |
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| End bp | 1181590 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637343087 |
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| Product | dihydrodipicolinate reductase |
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| Protein accession | NP_716765 |
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| Protein GI | 229220630 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0289] Dihydrodipicolinate reductase |
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| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGGAC AAGTGAGAGT TGCCATTGTC GGCGCGGGCG GACGCATGGG ACGGACTCTT
ATTGAATCGG CTTATCATCA AGAGCATATT CGCTTAGGCG CTGCTATTGA GCGTCCGGGT
TCAAGCTTAG TGGGCGTGGA TGCGGGCGAG CTTGCTGGCG TGGGTAAGTT AAATATCATG
ATCATGGACT CGCTCGACTA TGCGACCGAT GATTTTGATG TGTTGATTGA TTTCACTGCG
CCTGAGGCCA GTATTGTCCA TTTAGACTGG TGTGTGCGCC ATAAGAAAGC CATGGTGATC
GGCACAACCG GTTTCAATCA TGCTCAAAAA GAGCAGATCA ATGCCTTTGC CGAGCAAACG
CCGGTAGTGA TGGCGCCGAA TATGTCAGTT GGTGTGAACC TGATGTGGAA ATTGCTCGAG
TTGGCCGCTG AGGTCATGGG CGATTACACC GATATCGAAA TTATCGAAGG TCACCACCGA
TATAAAAAAG ATGCACCATC TGGCACGGCG CTAAAAATGG GTGAAGTAAT TGCTAAAACC
TTAGGTCGCG ATCTCGAAAA GTGCGCTGTC TATGGCCGAG AAGGGATCAC TGGTGAGCGC
GATCGTGAAA CCATTGGTTT TGCTACAGTG CGCGCTGGCG ACTTAGTCGG TGAGCATACC
GCTATGTTTG CCGATATTGG TGAGCGTTTA GAGATCACCC ATAAAGCCTC GAGTCGTATG
ACCTTCGCCA ATGGTGCTAT GCGTGCCGCC CATTGGTTAG TGGAGCAAAA GCCGGGTCTG
TATGATATGC AGCAGGTATT AGGTTTGAAT TAA
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| Protein sequence | MSGQVRVAIV GAGGRMGRTL IESAYHQEHI RLGAAIERPG SSLVGVDAGE LAGVGKLNIM
IMDSLDYATD DFDVLIDFTA PEASIVHLDW CVRHKKAMVI GTTGFNHAQK EQINAFAEQT
PVVMAPNMSV GVNLMWKLLE LAAEVMGDYT DIEIIEGHHR YKKDAPSGTA LKMGEVIAKT
LGRDLEKCAV YGREGITGER DRETIGFATV RAGDLVGEHT AMFADIGERL EITHKASSRM
TFANGAMRAA HWLVEQKPGL YDMQQVLGLN
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