Gene SO_1137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1137 
Symbol 
ID1168968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1178905 
End bp1179714 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content52% 
IMG OID637343085 
Producthypothetical protein 
Protein accessionNP_716762 
Protein GI24372720 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAA AGCGATTAAG CTTAGTGTTG ATGACTGCTG CGCTCGGATT AACCGCCTGC 
GCGACGACAC AGTCGCCCAC TGGACGTAGC CAAACCTTGC TCTATTCATC CTCGCAGATG
CAGCAAATGG GCGATGCGTC TTTTGCTGAG ATGAAAAAGC AGCAGAAGAT CAGTGGCAAT
AAAAAACTCA CACAATACGT GAATTGTGTC GCCAATCGTG TGACGGCCGT GTTGCCCGAT
CAAACCCAGA AATGGGATGT GGTGTTGTTT GATTCTGAAC AAGTCAACGC CTTTGCGTTG
CCTGGCGGAC ATATTGGGGT ATATACCGGA TTATTAAAAG TAGCGAGTAC GCCGGATCAA
CTGGCGACCG TGTTAGGGCA TGAAGTTGCC CACGTATTGG CGCAACATGG CAATGAGCAA
GTGTCGCGGT CGCAGATGAC GGGCATGGGG ATGCAAATTG CCGATGCGGC GTTGGGGGCG
GGGGGCGTTT CTAACCGTGA CTTATATATG TCGGCGCTGG GGCTTGGGGC ACAAGTTGGG
GTGATTTTAC CTTTTGGTCG AGCCCAAGAG AGTGAGGCCG ATATTATGGG GCTGGAGTTG
ATGGCGCGGG CGGGCTTTGA TCCGGCGCAG AGTGTAGTGC TCTGGCAGAA TATGTCGAAA
GCGGGCGGTG GAAAAGGGCC AGAGCTGTTA TCGACTCACC CATCAAACAA CAATCGTATC
GCCCAACTTG AGCAATTACA GGGGCAAATG CAGCCTTTGT ATCAGAGCGC AAAGGCGAAT
ATAAAAAACC AATGCGCCGC GCCTAAATAG
 
Protein sequence
MKSKRLSLVL MTAALGLTAC ATTQSPTGRS QTLLYSSSQM QQMGDASFAE MKKQQKISGN 
KKLTQYVNCV ANRVTAVLPD QTQKWDVVLF DSEQVNAFAL PGGHIGVYTG LLKVASTPDQ
LATVLGHEVA HVLAQHGNEQ VSRSQMTGMG MQIADAALGA GGVSNRDLYM SALGLGAQVG
VILPFGRAQE SEADIMGLEL MARAGFDPAQ SVVLWQNMSK AGGGKGPELL STHPSNNNRI
AQLEQLQGQM QPLYQSAKAN IKNQCAAPK