Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1137 |
Symbol | |
ID | 1168968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1178905 |
End bp | 1179714 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637343085 |
Product | hypothetical protein |
Protein accession | NP_716762 |
Protein GI | 24372720 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAA AGCGATTAAG CTTAGTGTTG ATGACTGCTG CGCTCGGATT AACCGCCTGC GCGACGACAC AGTCGCCCAC TGGACGTAGC CAAACCTTGC TCTATTCATC CTCGCAGATG CAGCAAATGG GCGATGCGTC TTTTGCTGAG ATGAAAAAGC AGCAGAAGAT CAGTGGCAAT AAAAAACTCA CACAATACGT GAATTGTGTC GCCAATCGTG TGACGGCCGT GTTGCCCGAT CAAACCCAGA AATGGGATGT GGTGTTGTTT GATTCTGAAC AAGTCAACGC CTTTGCGTTG CCTGGCGGAC ATATTGGGGT ATATACCGGA TTATTAAAAG TAGCGAGTAC GCCGGATCAA CTGGCGACCG TGTTAGGGCA TGAAGTTGCC CACGTATTGG CGCAACATGG CAATGAGCAA GTGTCGCGGT CGCAGATGAC GGGCATGGGG ATGCAAATTG CCGATGCGGC GTTGGGGGCG GGGGGCGTTT CTAACCGTGA CTTATATATG TCGGCGCTGG GGCTTGGGGC ACAAGTTGGG GTGATTTTAC CTTTTGGTCG AGCCCAAGAG AGTGAGGCCG ATATTATGGG GCTGGAGTTG ATGGCGCGGG CGGGCTTTGA TCCGGCGCAG AGTGTAGTGC TCTGGCAGAA TATGTCGAAA GCGGGCGGTG GAAAAGGGCC AGAGCTGTTA TCGACTCACC CATCAAACAA CAATCGTATC GCCCAACTTG AGCAATTACA GGGGCAAATG CAGCCTTTGT ATCAGAGCGC AAAGGCGAAT ATAAAAAACC AATGCGCCGC GCCTAAATAG
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Protein sequence | MKSKRLSLVL MTAALGLTAC ATTQSPTGRS QTLLYSSSQM QQMGDASFAE MKKQQKISGN KKLTQYVNCV ANRVTAVLPD QTQKWDVVLF DSEQVNAFAL PGGHIGVYTG LLKVASTPDQ LATVLGHEVA HVLAQHGNEQ VSRSQMTGMG MQIADAALGA GGVSNRDLYM SALGLGAQVG VILPFGRAQE SEADIMGLEL MARAGFDPAQ SVVLWQNMSK AGGGKGPELL STHPSNNNRI AQLEQLQGQM QPLYQSAKAN IKNQCAAPK
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