Gene SO_1127 details

Gene Information

• Locus tag: SO_1127
• Symbol: dnaJ
• ID: 1168959
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 1170781
• End bp: 1171917
• Gene Length: 1137 bp
• Protein Length: 378 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637343076
• Product: chaperone protein DnaJ
• Protein accession: NP_716752
• Protein GI: 24372710
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain
• TIGRFAM ID: [TIGR02349] chaperone protein DnaJ

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAAGC GAGATTATTA CGAAGTATTA GGCGTTGGCC GTGACGCCAG CGAGCGTGAA 
ATTAAAAAAG CCTACAAGCG TTTGGCGATG AAGTTTCACC CCGATCGCAA CCCTGGTGAT 
AAAGCTGCCG AAGCGAGCTT CAAAGAAGTT AAAGAAGCCT ACGAAATCCT AACCGATGCC 
AACAAAAAAG CGGCCTATGA CCAGTTTGGT CATGCGGGTG TGGATCCCAA TCGCGGCGGC 
GGTGGTGGCT ATGGCGGCGC GGGAGATTTC GGTGATATTT TCGGTGATGT CTTTGGCGAT 
ATTTTCGGCG GTGGACGCCG TGGCGGCGGT CAACGCCAAG CGGCCCGCGG CTCAGATTTA 
CGTTACAACC TAGAGTTATC ACTGGAAGAA GCCGTTAAAG GCCTCACCAA AGAACTGCGT 
ATCCCAACCT TAGCCAGCTG TGATGTATGT GACGGCAGCG GTGCGAAAAA AGGCACCTCG 
GCGACCACCT GTACAACCTG TCATGGTCAA GGCCAAGTGC AAATGCGCCA AGGTTTCTTT 
ACCGTGCAAC AGCCTTGTCC AACCTGTCAT GGTCGCGGCA AGATCATTAA AGATCCTTGC 
GCTAAGTGCC ATGGTGATGG TCGTGTCGAG AAGACGAAGA CGCTGTCAGT TAAGATCCCA 
GCTGGTGTCG ACACTGGTGA CCGTATCCGT TTAGCAGGTG AAGGTGAAGC GGGCGAGTTT 
GGCGCGCCAG CGGGCGATTT ATATGTTCAG GTCAGTGTAC GTGAACATGC CATCTTTGTT 
CGCGATGGCA ACAACCTCTA CTGCGAAGTG CCGATTTCAT TCAGTAAAGC GGCGCTCGGC 
GGCGAGATTG AAGTCCCAAC ACTGGATGGC AAAGTCAGCC TGAAGATCCC TGCCGAAACT 
CAAACGGGCC GTATGTTCCG TCTGCGTGGT AAAGGGGTTA AATCGGTTCG CAGCCATGCC 
GTTGGCGACT TGCTCTGCAA AGTCGTGATG GAAACGCCAG TCAACCTAAA CGAGCGTCAG 
AAAGAACTAC TGCGTGAGTT TGAGGCGACC TTAACCGGCG AATCAAAGAA GCACAGCCCA 
AAGGCTGAAG GCTTTTTTGA TGGCGTGAAG AAGTTCTTCC AAGACCTAAA TAGCTAA 

 

Protein sequence

MSKRDYYEVL GVGRDASERE IKKAYKRLAM KFHPDRNPGD KAAEASFKEV KEAYEILTDA 
NKKAAYDQFG HAGVDPNRGG GGGYGGAGDF GDIFGDVFGD IFGGGRRGGG QRQAARGSDL 
RYNLELSLEE AVKGLTKELR IPTLASCDVC DGSGAKKGTS ATTCTTCHGQ GQVQMRQGFF 
TVQQPCPTCH GRGKIIKDPC AKCHGDGRVE KTKTLSVKIP AGVDTGDRIR LAGEGEAGEF 
GAPAGDLYVQ VSVREHAIFV RDGNNLYCEV PISFSKAALG GEIEVPTLDG KVSLKIPAET 
QTGRMFRLRG KGVKSVRSHA VGDLLCKVVM ETPVNLNERQ KELLREFEAT LTGESKKHSP 
KAEGFFDGVK KFFQDLNS