Gene SO_1126 details

Gene Information

• Locus tag: SO_1126
• Symbol: dnaK
• ID: 1168958
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 1168751
• End bp: 1170670
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637343075
• Product: molecular chaperone DnaK
• Protein accession: NP_716751
• Protein GI: 24372709
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAAAA TTATTGGTAT CGACTTAGGC ACAACAAACT CTTGTGTAGC TGTCCTCGAT 
GGTGGCAAAG CACGCGTATT AGAAAATGCT GAAGGCGATC GCACAACCCC GTCTATCATC 
GCTTACACAG ATGATGAGAC CATTGTGGGC CAACCAGCAA AACGCCAAGC TGTAACAAAC 
CCAAATAACA CATTCTTCGC GATCAAGCGT TTGATCGGTC GTCGCTTTAA AGATGACGAA 
GTTCAACGTG ACGTGAACAT CATGCCATTC AAAATCATTG CAGCCGACAA CGGTGATGCT 
TGGGTTGAGT CACGTGGCAA CAAAATGGCT CCACCACAGG TTTCTGCTGA AATCTTGAAA 
AAGATGAAGA AAACGGCAGA AGACTTTTTA GGTGAAGAAG TCACAGAAGC GGTTATTACT 
GTTCCTGCAT ACTTTAACGA TTCACAACGT CAAGCCACTA AAGATGCGGG TCGCATCGCG 
GGCCTTGAAG TGAAGCGTAT TATCAACGAA CCAACGGCCG CAGCACTGGC CTACGGTATC 
GACAAGAAGC AAGGCGACAA TATCGTTGCA GTGTACGACT TAGGTGGTGG TACGTTCGAT 
ATCTCGATCA TCGAAATCGA CAGCAACGAC GGCGACCAAA CCTTCGAAGT ATTAGCGACA 
AACGGTGACA CCCACTTAGG TGGTGAAGAC TTTGACAACC GTTTAATCAA CTACTTAGCT 
GACGAATTCA AGAAAGAGCA AGGCTTAGAT CTGCGTAAAG ATCCATTAGC AATGCAACGT 
CTGAAAGAAG CGGCTGAAAA GGCGAAGATT GAGCTTTCAA GCACCAACCA AACTGAAGTG 
AACCTGCCAT ACATCACTGC CGATGCAACA GGTCCTAAGC ACTTAGTGGT AAAAATCACC 
CGTGCTAAGT TAGAGTCACT GGTTGAAGAC TTAATCATTC GTACTTTAGA GCCATTAAAA 
GTGGCACTGG CTGACGCTGA CCTATCAGTA TCAGACATTA ACGAAGTGAT TTTAGTGGGC 
GGTCAAACCC GTATGCCTAA GGTTCAAGAA GCAGTGACTA ACTTCTTCGG TAAAGAACCT 
CGTAAAGACG TAAACCCAGA CGAAGCGGTA GCCGTAGGTG CTGCGATTCA AGCGGGCGTA 
CTGTCAGGCG ACGTGAAAGA CGTTCTGCTG TTAGACGTAA CACCACTGTC TCTGGGTATC 
GAAACCATGG GCAGCGTAAT GACCAAGCTG ATTGAGAAAA ACACGACTAT TCCGACTAAG 
GCACAGCAAG TGTTCTCAAC AGCCGATGAC AACCAAAGTG CAGTAACTAT TCACGTACTG 
CAAGGTGAGC GTAAGCAAGC GAGCGCGAAC AAGTCATTAG GTCAATTTAA CTTAGACGGT 
ATTGAGCCTG CACCACGTGG CATGCCACAA ATTGAAGTGA TGTTCGATAT CGACGCTGAC 
GGTATTCTGC ATGTTTCTGC CACCGATAAG AAAACCGGTA AGAAACAAAA CATCACCATC 
AAAGCTTCTT CTGGCTTAAG CGAAGAAGAA GTGGCGCAAA TGGTACGTGA CGCTGAAGCC 
CACGCTGAAG AAGACAAAAA GTTTGAAGAG CTAGTGCAAT CTCGCAACCA AGCTGACGGC 
TTAGTTCACG CAACTAAGAA ACAAGTTGAA GAGGCGGGCG ATGCACTGCC AAGCGAAGAC 
AAAGCGAAGA TTGAAGCGGC AATGAGCGCG GTTGAAACTG CTGTAAAAGG CAATGACAAA 
GAAGCCATTG AAAAAGCGAC TCAAGCGCTT ATCGAAGCCT CAGCAAAGCT GATGGAAATC 
GCTCAGGCTA AAGCTCAAAC TCAAGGCGGC GCACAAGAAG GTGCAGCTAA ACAGTCTAAC 
GCGACTGCCG ATGACGTTGT CGATGCTGAA TTTGAAGAAG TGAAAGACGA CAAGAAATAA 

 

Protein sequence

MGKIIGIDLG TTNSCVAVLD GGKARVLENA EGDRTTPSII AYTDDETIVG QPAKRQAVTN 
PNNTFFAIKR LIGRRFKDDE VQRDVNIMPF KIIAADNGDA WVESRGNKMA PPQVSAEILK 
KMKKTAEDFL GEEVTEAVIT VPAYFNDSQR QATKDAGRIA GLEVKRIINE PTAAALAYGI 
DKKQGDNIVA VYDLGGGTFD ISIIEIDSND GDQTFEVLAT NGDTHLGGED FDNRLINYLA 
DEFKKEQGLD LRKDPLAMQR LKEAAEKAKI ELSSTNQTEV NLPYITADAT GPKHLVVKIT 
RAKLESLVED LIIRTLEPLK VALADADLSV SDINEVILVG GQTRMPKVQE AVTNFFGKEP 
RKDVNPDEAV AVGAAIQAGV LSGDVKDVLL LDVTPLSLGI ETMGSVMTKL IEKNTTIPTK 
AQQVFSTADD NQSAVTIHVL QGERKQASAN KSLGQFNLDG IEPAPRGMPQ IEVMFDIDAD 
GILHVSATDK KTGKKQNITI KASSGLSEEE VAQMVRDAEA HAEEDKKFEE LVQSRNQADG 
LVHATKKQVE EAGDALPSED KAKIEAAMSA VETAVKGNDK EAIEKATQAL IEASAKLMEI 
AQAKAQTQGG AQEGAAKQSN ATADDVVDAE FEEVKDDKK