Gene SO_1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1124 
Symbol 
ID1168956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1166902 
End bp1167378 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content49% 
IMG OID637343073 
Producthypothetical protein 
Protein accessionNP_716749 
Protein GI24372707 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCTG CCGTACAAAT GGCAAAGAAA GCCAAAATTC CCTTTGAAGT TTTAGAATAC 
AGTCACGACC CACACTGCGC CGCTTACGGC GAAGAAGCCG CCAATGTGTT AGGGCTCGCC 
CCCGCGCAGG TATTTAAAAC CTTACTGGTC GCGACCGATA AAGCCCATGC GCCCCTTGCG 
GTCGCGCTAG TCCCCGTTGA TCATCAACTC AATTTAAAAG CCGTTGCCAA ATGTTTAGGC 
CAGAAAAAAC TGCAGATGGC CGATGCAGAT TTAGCCCAAA AGTCTTCAGG CTATTTGGTT 
GGAGGTATCA GCCCATTAGC GCAAAAAAAG CTGCTGCCAA CGATCATTGA TGAAAGTGCT 
AAGCAATTTG ACAAAATCTA TGTCAGCGCA GGCCGCCGTG GGCTTGAGAT ATGTCTCACG 
GCAAATGACT TAGCAAAATT GTGCCGCGGC TCATTTGCGG ATATTAAAAC GCTATGA
 
Protein sequence
MTPAVQMAKK AKIPFEVLEY SHDPHCAAYG EEAANVLGLA PAQVFKTLLV ATDKAHAPLA 
VALVPVDHQL NLKAVAKCLG QKKLQMADAD LAQKSSGYLV GGISPLAQKK LLPTIIDESA 
KQFDKIYVSA GRRGLEICLT ANDLAKLCRG SFADIKTL