| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1103 |
|---|
| Symbol | nqrA-2 |
|---|
| ID | 1168936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 1146236 |
|---|
| End bp | 1147570 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637343054 |
|---|
| Product | Na(+)-translocating NADH-quinone reductase subunit A |
|---|
| Protein accession | NP_716729 |
|---|
| Protein GI | 24372687 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1726] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA |
|---|
| TIGRFAM ID | [TIGR01936] NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTACAA TTAAGAAAGG ATTGGAACTG CCTATAGCAG GCGGACCAGA GCAAGTTATC
CATAATGGCC CAGCCATTAA ACATGTAGCT ACTTTGGGTG AAGAGTATAT TGGCTTACGT
CCAACGATGA AGATCAAAGT GGGCGATAAA GTACAAAAAG GTCAGGTGAT TTTCGAAGAT
AAGAAAAATC CTGGCGTAAA ATATACGGCT TTAGCCAGTG GTACTATATT AGACATTAAC
CGGGGCGCCC AGCGTGTGCT GCAGTCTGTT GTTATAGAAG TGGAAGGTAA CGACAGCATT
GCCTTTGCGA AATATGATGC CACTGCACTA GATACGCTTG ATGCGCAATT GGTCCGTGAT
AACCTGATTG AATCAGGTTT ATGGACTGCA TTGCGTACAC GTCCTTTCAG CAAAGTGCCA
GCTGTAGATT CTTCTGCTGC GGGTATTTTT GTAACCGCCA TTGATACGCA ACCCCATGCA
GCCGATCCTG TAGTAGTTAT CCGCGAGCAT AAAGAAGATT TTGCTAATGG TCTTAAAGTC
TTAGCAAGAC TTACCGAAGA TAAAGTTTAC CTTTGTAAAG CGCCTGGCGC CGATATTCCT
GCCGCTAATG CCCAAGTTGA AGAATTTGCC GGTATTCACC CTGCGGGTCT TGTTGGTACT
CATATCCATT TCCTACTTCC CGCCTCTGCA AAACGTACTG TTTGGCATGT CGGTTACCAA
GATGTTATAG CCATTGGTCA GCTATTTACA ACAGGTCAAC TGCATACTGA ACGTGTAGTC
GCGATTGCGG GTCCCAAAGC AGCTAAGCCA AGATTAGTTC GCACTGTTTT AGGTGCAAGC
ATGACTGAAC TGACTGCGGG CGAAACCCTA GCGGGTAATG TGCGCTTTAT TTCAGGCTCT
GTGCTCAATG GTCGTACAGC GATAGGTCCT CAAGGGTATT TAGGCCGTTA CCATATGCAG
GTGAGTCTGC TAGAAGAAGG CACGGAAAAA GAATTTTTGG GTTGGGTATT ACCTGGCGCG
AACAAATTCT CTATCACTCG TGCATTCCTT GGTCACTTTA GCTCTTCTCG TTTGTTCAAT
ATGACAACGA GCACAGGTGG TTCAGACCGC GCTATGGTAC CTATTGGTAA CTATGAGCGT
GTAATGCCTC TGGATATTCT TCCTACAATG TTACTGCGTG ACCTGATTTC GGGTGACTTT
GACGGTGCAG TTACATTAGG CGCGTTAGAG TTGGATGAAG AAGATCTCGC ACTGTGTACT
TTCGTATGTC CAGGCAAATA TGACTACGGT TCATATCTGC GTGATTGTTT AGATACGATC
GTGAGGGAAG GCTAA
|
|---|
| Protein sequence | MITIKKGLEL PIAGGPEQVI HNGPAIKHVA TLGEEYIGLR PTMKIKVGDK VQKGQVIFED
KKNPGVKYTA LASGTILDIN RGAQRVLQSV VIEVEGNDSI AFAKYDATAL DTLDAQLVRD
NLIESGLWTA LRTRPFSKVP AVDSSAAGIF VTAIDTQPHA ADPVVVIREH KEDFANGLKV
LARLTEDKVY LCKAPGADIP AANAQVEEFA GIHPAGLVGT HIHFLLPASA KRTVWHVGYQ
DVIAIGQLFT TGQLHTERVV AIAGPKAAKP RLVRTVLGAS MTELTAGETL AGNVRFISGS
VLNGRTAIGP QGYLGRYHMQ VSLLEEGTEK EFLGWVLPGA NKFSITRAFL GHFSSSRLFN
MTTSTGGSDR AMVPIGNYER VMPLDILPTM LLRDLISGDF DGAVTLGALE LDEEDLALCT
FVCPGKYDYG SYLRDCLDTI VREG
|
|---|
| |