| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1102 |
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| Symbol | |
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| ID | 1168935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1143783 |
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| End bp | 1145834 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637343053 |
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| Product | TonB-dependent receptor domain-containing protein |
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| Protein accession | NP_716728 |
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| Protein GI | 24372686 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAGTC GCTATTTTGT CATGTCGCTG ACCGCGCTTG CGGTTTCCTG TGTTTACGCT
AATTCACTTA ATGCAAATCC CCTCTATTCT CAAACACTTG ATTTAGCGAA GCTCAATGAT
CAGTATCATT CTACCGATGA TGCAATGCAG TTAAGCAATC TCAATAGCCT AACGCTGCTT
CGGGCTGACC ATAGTGGCAA TTCCGCCAAT ATCAGTATGC GCTCAGCCAC CCAAGGTGTG
GCTGTGATGC AAGATAGAGT GTATTTCTCA CCTGCGCCCT ATTCGGCACC GCAATTGCAG
CTATTACCCC ATCTTTTGTT GCAGCAAAGT GTGACGACTA CGCCACTGGC CAATATGGCT
GTTGGTGGTC AGGGATCATT TGGCGTGGTG GACTACCAAA GCCTTAACAT TATTGAACGC
TCACAATCTG GCAGTGTTCA AATCGAGGGG ACGACGGATT CAGATGTGAA TGCGGGCATG
CGTTGGGGCG TTAATCAAAA AGAATACGGT GCCTTATTTG CGGCTAATTA TATTAAAGAA
CAAGGTGATG CGATTTTTTT CAACGGCAGC GATGCTGACA GAAAAAAAAT GGATATGTTG
TTTAAGGTCA ATGCTTCAAG CTTACTTGGC GCCCGCAGTC CGCAGCAAAC GGAATTTACC
TATCAATTTA TCGATGATGA TAGTTACCGT TCATTGCTTG GGATCACTGC CGCCGACTGG
CAGCAGGATC CTTTGCTGCT GTATTCCGCT ACCGCACAAG ATAAACATCA AGGACGGCAA
CATAAATACC AGTTATCACA TCAAGTCAAC TTAGGTGATA GCAAGGTGAT GAGCGACTTT
TACTATCAAT TCTATTCACA ACGACTGGAT CAGCTTGGCG CGTTTAATGG GCAAAATATT
GGCTTGGGAA CGCTTTACGA CATTGCCGCC TTCGATCGTA ATCCCAGTGC GAATGGCGCC
GATGTAAATA TGTTGGTGCA AGACAATGAT TACAGTGCAT TCGGTGCCCA GACTCAGTCG
ATAAACCAAT ACGGCGAACA TCAAATTACC TACAGCGCTC GTTATCATAC CGATAAAGCC
GAGATGCGTT TTGGTGATCA AACTGCATTA TGGCAAGCTG ACAGAAGTAT CGTCCGTGAT
GAGTCTAATG CGGTGTTAGC CTACACCGAT GATGCCACGG CGCTGACGTC GGCAATCGAC
TCTTTATGGC GTTGGCAGGG CATGCAAATC AAGTTAGGGC TTACTTACGA GCATGTTAGT
GTTAATCGTG AAGTGAGCTT AGCTTTTGCT GGGCTTGACG AAGCGGACTT TTCTGATAGC
GATTGGATGC CGCAACTTGG TGTGCTTTAT GATGCAGGCG ATTGGCGTTT TAGTACCGAT
ATACGCCGGG CATGGGCTGC GGCGAGTGCG GGTAATCTTA CCCAAGACGC TCAGGAATCG
CTTCATTATC AAGTCAGTGC CCAATATGCG AGTGACGGCA TTAAGGCTGA TTTGCGGGCT
TATGTGCAAG AATTTGATAA TCTTCATGTG GATTGTGATA GTTACTCCAT GTGCGTCGAT
TCTCGTCTGC TAACTCAAGA AAATATACCC GATGTGCTTA CCTATGGGGT TGAATTCGGC
CTGGGCTATC GCTCGATGTT GGGTGAGCTT GAATTACCCT TAGAGCTAAG TTATCAGTAT
CTTAGCGCTG AATATCAGAC GAGCACCTGC ACCGATATCC AAGGTTGCGT CCTGGAGGGC
GACAAACTGG CTTGGTTACC CGAGCACCAA TTGCAATTGA GCGCGGGGAT TGAATACGCC
CAATATCAAT TAAACCTTGT CGCTGCTTAT CAATCTGAGC GTGATTTCAG TCAGTATGGT
AGTGAGTTGC AGCGTGTTGA CGGTCAATGG CGTGCCGATA TAGCGGCAAA TTACGATATT
GATAAGCACC ACAGGGTGTA TTTTCGCCTT GAAAACCTAT TCGATGAATC TTTAGTGACA
ACAGTATCAA ATAGTGGAAT TCGAACTGAA AATGGACGGA TCAGCTATTT AGGTTATCAA
TGGCGGTTCT AA
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| Protein sequence | MSSRYFVMSL TALAVSCVYA NSLNANPLYS QTLDLAKLND QYHSTDDAMQ LSNLNSLTLL
RADHSGNSAN ISMRSATQGV AVMQDRVYFS PAPYSAPQLQ LLPHLLLQQS VTTTPLANMA
VGGQGSFGVV DYQSLNIIER SQSGSVQIEG TTDSDVNAGM RWGVNQKEYG ALFAANYIKE
QGDAIFFNGS DADRKKMDML FKVNASSLLG ARSPQQTEFT YQFIDDDSYR SLLGITAADW
QQDPLLLYSA TAQDKHQGRQ HKYQLSHQVN LGDSKVMSDF YYQFYSQRLD QLGAFNGQNI
GLGTLYDIAA FDRNPSANGA DVNMLVQDND YSAFGAQTQS INQYGEHQIT YSARYHTDKA
EMRFGDQTAL WQADRSIVRD ESNAVLAYTD DATALTSAID SLWRWQGMQI KLGLTYEHVS
VNREVSLAFA GLDEADFSDS DWMPQLGVLY DAGDWRFSTD IRRAWAAASA GNLTQDAQES
LHYQVSAQYA SDGIKADLRA YVQEFDNLHV DCDSYSMCVD SRLLTQENIP DVLTYGVEFG
LGYRSMLGEL ELPLELSYQY LSAEYQTSTC TDIQGCVLEG DKLAWLPEHQ LQLSAGIEYA
QYQLNLVAAY QSERDFSQYG SELQRVDGQW RADIAANYDI DKHHRVYFRL ENLFDESLVT
TVSNSGIRTE NGRISYLGYQ WRF
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