Gene SO_1093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1093 
Symbol 
ID1168926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1131541 
End bp1132863 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content49% 
IMG OID637343044 
ProductISSod7, transposase 
Protein accessionNP_716719 
Protein GI24372677 
COG category[L] Replication, recombination and repair 
COG ID[COG3385] FOG: Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTCT CAGAAGCACT TGCTCGCACT CATATTACCC GCCTAACCGA ATTCACCTGC 
CTCGCTGATG TGTTAGAGCC TGAGTTAATT CAATCCTGTT TAGACTCACA AGGCGTTGCT
ACTCTCAGAC GACGCAAATT GCCGATGGAC GCGATGATTT GGGCCGTTAT CGGAATGGCC
TTGTTCCGAG GGGAGTCTGT TCGGTCACTC ATCAACAAAC TCGACATTGT TTTGCCGCAA
GAGATTGATT ATGTTGCCCG TAGTGCCGTG ACTCAGGCGC GTAAACGATT AGGCAGTGAG
GTCGTTCGAG AAGTGTTCAG CCGTAGCGCG AATACCTGGC ACGCGAGAGC CGAACACCCT
CATTGGTGTG GTCTGAACCT GTATGGCGTC GATGGTGTGG TGTGGCGGAC ACCCGATAGT
GTTCAAAATC AAGCAGCCTT TGGACGAACC GCCAACGCTT CCGGCGAAGC GGCTTATCCG
CAAATTCGCA TGGTTTGCCT GATGGAGTTA AGCAGCCATT TGTTGGTCAA CAGCGCCTTT
GATTCGGTTG TCGAAAATGA AATGAACTTA GCCTCTCAGC TCATTTCTAG CATCCCCAAT
CACAGTCTAA CCCTATTTGA CCGAGGATTT TATTCGCTCG GCCTGCTGCA CGCTTGGCAG
CAAGCACAAC CTAATAGCCA CTGGTTGTTG CCATTGAAGA AAGGCACTCA ATATGAGGTG
GTTAGAACGC TGGGAAAACA TGACCAGTGG GTGAAACTCA CCACCACGCC TCAAGCAAGA
AAGAAATGGC CGCAGCTCCC TGACACCCTT GAAGCGCGCT TACTGACTAA GACGGTGAAA
GGTAAGTCAG TCGCCATATT GACCTCGTTA ACAGACCCAA TGCGTTACCC AAGTGAAGAC
ATCGTCGACT TATATGCCCA TCGTTGGGAA ATCGAACTGG GCTACAGAGA GATGAAACAA
CATTTACTGG AGAGCCGTTT TACGCTCCGC AGCCAACTGC CTGAGCTGGT GTTCCAAGAG
CTATGGGGGG TGCTACTGGC CTACAATCTC ATTAGATACA AGATGTTACT GATGGCCAAA
AGCTTACCAT CGGTTCATCC CAATCAACTG AGTTTTCGTG ATGCAGCGAG TCATATCATC
TTCAAGTTGA CACAGTTGTC ATCACAAACG CCGGGAAATG TTCCCAGAGA CGTATTGGAT
ATAGAACGCA ATGCACGACA ATTTAAATTG GATGGTAAAC GGGAAAGGGC TTATCCAAGG
ATCCTTAAAA TGAGCAAAAA TAAGTTTCCG GTTAGATCAA AGAAAAATGC CGTTCACTCT
TAA
 
Protein sequence
MQLSEALART HITRLTEFTC LADVLEPELI QSCLDSQGVA TLRRRKLPMD AMIWAVIGMA 
LFRGESVRSL INKLDIVLPQ EIDYVARSAV TQARKRLGSE VVREVFSRSA NTWHARAEHP
HWCGLNLYGV DGVVWRTPDS VQNQAAFGRT ANASGEAAYP QIRMVCLMEL SSHLLVNSAF
DSVVENEMNL ASQLISSIPN HSLTLFDRGF YSLGLLHAWQ QAQPNSHWLL PLKKGTQYEV
VRTLGKHDQW VKLTTTPQAR KKWPQLPDTL EARLLTKTVK GKSVAILTSL TDPMRYPSED
IVDLYAHRWE IELGYREMKQ HLLESRFTLR SQLPELVFQE LWGVLLAYNL IRYKMLLMAK
SLPSVHPNQL SFRDAASHII FKLTQLSSQT PGNVPRDVLD IERNARQFKL DGKRERAYPR
ILKMSKNKFP VRSKKNAVHS